:orphan: .. _ahelp_SurfDsetInfo: ************ SurfDsetInfo ************ .. contents:: :local: | .. code-block:: none Usage: SurfDsetInfo [options] -input DSET1 -input DSET2 ... or: SurfDsetInfo [options] DSET1 DSET2 ... Optional Params: -debug DBG: if DBG = 2, show dset->ngr in its entirety in NIML form. SUMA dataset input options: -input DSET: Read DSET1 as input. In programs accepting multiple input datasets you can use -input DSET1 -input DSET2 or input DSET1 DSET2 ... NOTE: Selecting subsets of a dataset: Much like in AFNI, you can select subsets of a dataset by adding qualifiers to DSET. Append #SEL# to select certain nodes. Append [SEL] to select certain columns. Append {SEL} to select certain rows. The format of SEL is the same as in AFNI, see section: 'INPUT DATASET NAMES' in 3dcalc -help for details. Append [i] to get the node index column from a niml formatted dataset. * SUMA does not preserve the selection order for any of the selectors. For example: dset[44,10..20] is the same as dset[10..20,44] Also, duplicate values are not supported. so dset[13, 13] is the same as dset[13]. I am not proud of these limitations, someday I'll get around to fixing them. [-novolreg]: Ignore any Rotate, Volreg, Tagalign, or WarpDrive transformations present in the Surface Volume. [-noxform]: Same as -novolreg [-setenv "'ENVname=ENVvalue'"]: Set environment variable ENVname to be ENVvalue. Quotes are necessary. Example: suma -setenv "'SUMA_BackgroundColor = 1 0 1'" See also options -update_env, -environment, etc in the output of 'suma -help' Common Debugging Options: [-trace]: Turns on In/Out debug and Memory tracing. For speeding up the tracing log, I recommend you redirect stdout to a file when using this option. For example, if you were running suma you would use: suma -spec lh.spec -sv ... > TraceFile This option replaces the old -iodbg and -memdbg. [-TRACE]: Turns on extreme tracing. [-nomall]: Turn off memory tracing. [-yesmall]: Turn on memory tracing (default). NOTE: For programs that output results to stdout (that is to your shell/screen), the debugging info might get mixed up with your results. Global Options (available to all AFNI/SUMA programs) -h: Mini help, at time, same as -help in many cases. -help: The entire help output -HELP: Extreme help, same as -help in majority of cases. -h_view: Open help in text editor. AFNI will try to find a GUI editor -hview : on your machine. You can control which it should use by setting environment variable AFNI_GUI_EDITOR. -h_web: Open help in web browser. AFNI will try to find a browser. -hweb : on your machine. You can control which it should use by setting environment variable AFNI_GUI_EDITOR. -h_find WORD: Look for lines in this programs's -help output that match (approximately) WORD. -h_raw: Help string unedited -h_spx: Help string in sphinx loveliness, but do not try to autoformat -h_aspx: Help string in sphinx with autoformatting of options, etc. -all_opts: Try to identify all options for the program from the output of its -help option. Some options might be missed and others misidentified. Use this output for hints only. Compile Date: Apr 24 2024