.. _references:

##########
References
##########

..  A slightly odd way of formatting the bibliography part of this, I
    know... But this balances a few things, importantly: 1) clearly
    delineating each reference, and 2) starting each of the
    refereneces at the same distance from the left margin.

    The reference label is defined by choosing the first letter of
    each author's surname, followed by the underscore, and then the
    year.  For works with more than 6 authors, I would recommend
    something like 'X_etal_2015' (and such consideration has led to
    the horizontal starting point of the second column; also, if there
    is more than one paper by the same group or group name, one can
    add a single letter to the year, e.g., 'X_etal_2015a',
    'X_etal_2015b', etc.).

    Please add papers alphabetically by the first author's surname.

    The vertical lines make each facet of the citation start on a new
    line (just looked nice visually).

    Eventually, we can put links directly to the papers here!

================  =======================================================

.. [CASLC_2014]   | G Chen, NE Adleman, ZS Saad, E Leibenluft, and RW Cox
                    (2014).
                  | **Applications of multivariate modeling to
                    neuroimaging group analysis: A comprehensive
                    alternative to univariate general linear model.**
                  | NeuroImage 99:571-588.

.. [C_1996]       | RW Cox (1996). 
                  | **AFNI: Software for analysis and visualization of
                    functional magnetic resonance neuroimages.**
                  | Computers and Biomedical Research 29:162-173.
                  
.. [SGCBDC_2009]  | ZS Saad, DR Glen, G Chen, MS Beauchamp, R Desai, 
                    RW Cox (2009).
                  | **A new method for improving
                    functional-to-structural MRI alignment using local
                    Pearson correlation.**
                  | NeuroImage 44:839-848.

.. [SR_2012]      | ZS Saad, RC Reynolds (2012). 
                  | **SUMA.** 
                  | Neuroimage 62:768-773.
                  
.. [S_etal_2013]  | ZS Saad, RC Reynolds, HJ Jo, SJ Gotts, G Chen, A
                    Martin, and RW Cox (2013). 
                  | **Correcting Brain-Wide Correlation Differences in
                    Resting-State FMRI.**
                  | Brain Connectivity 3(4):339-352.

.. [TS_2013]      | PA Taylor, ZS Saad (2013).  
                  | **FATCAT: (An Efficient) Functional And Tractographic
                    Connectivity Analysis Toolbox.**
                  | Brain Connectivity 3:523-535.
                  
.. [TCCS_2015]    | PA Taylor, G Chen, RW Cox, ZS Saad.  
                  | **Open Environment for Multimodal Interactive
                    Connectivity Visualization and Analysis.**
                  | Brain Connectivity 6(2):109-21.

.. [T_etal_2016]  | PA Taylor, A Alhamud , AJW van der Kouwe, MG Saleh,
                    B Laughton, EM Meintjes.
                  | **Assessing the performance of different DTI motion
                    correction strategies in the presence of EPI
                    distortion correction.**
                  | Human Brain Mapping (*in press*).
                  
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