.. _tempatl_other:

.. comment:
   This file was created by:
       afni_doc/python_help_scripts/make_list_of_pub_dist_atlases.py
   as part of the default documentation build.

*******************************
Other templates and atlases
*******************************

.. contents:: :local:

.. highlight:: none

Overview
=========

A default set of atlases and templates are distributed with the AFNI
binaries (the `afni_atlases_dist.tgz
<https://afni.nimh.nih.gov/pub/dist/atlases/afni_atlases_dist.tgz>`__).  
There are also additional atlas and template datasets (both human and
non-human) that can be downloaded, which are listed below.  This list
is likely to expand over time.

Note that there are also several ``@Install_*`` programs that may
provide a more convenient way to download+install some of the packages
listed here (as well as demos utilizing them, in some cases).

Links to additional datasets
=================================

The following table provides links to the available datasets and
datapackages.  

* Items ending with ``*.tgz`` are compressed tarballs. Clicking on
  these should lead to a download prompt.  Once downloaded, the files
  can be unpacked on the command line with ``tar -xf FILE.tgz`` or
  separately perhaps by clicking on it.

* Items without an apparent file extension are typically directories
  of related datasets.  Clicking on these should lead to a file
  directory (using a right-click or middle-click might be useful to
  open the link in a new tab), from which you can select data to
  download.

**Downloadable datasets:**

.. csv-table::
   :width: 100%

   `aal <https://afni.nimh.nih.gov/pub/dist/atlases/aal>`__,`AFNI_atlas_additions_2023 <https://afni.nimh.nih.gov/pub/dist/atlases/AFNI_atlas_additions_2023>`__,`afni_atlases_dist <https://afni.nimh.nih.gov/pub/dist/atlases/afni_atlases_dist>`__
   `afni_atlases_dist_0626_2022.tgz <https://afni.nimh.nih.gov/pub/dist/atlases/afni_atlases_dist_0626_2022.tgz>`__,`afni_atlases_dist_0906_2022.tgz <https://afni.nimh.nih.gov/pub/dist/atlases/afni_atlases_dist_0906_2022.tgz>`__,`afni_atlases_dist_1117_2023 <https://afni.nimh.nih.gov/pub/dist/atlases/afni_atlases_dist_1117_2023>`__
   `afni_atlases_dist_2024_0312 <https://afni.nimh.nih.gov/pub/dist/atlases/afni_atlases_dist_2024_0312>`__,`afni_atlases_dist_2024_0312.tgz <https://afni.nimh.nih.gov/pub/dist/atlases/afni_atlases_dist_2024_0312.tgz>`__,`afni_atlases_dist.tgz <https://afni.nimh.nih.gov/pub/dist/atlases/afni_atlases_dist.tgz>`__
   `archive <https://afni.nimh.nih.gov/pub/dist/atlases/archive>`__,`bnst <https://afni.nimh.nih.gov/pub/dist/atlases/bnst>`__,`brainnetome <https://afni.nimh.nih.gov/pub/dist/atlases/brainnetome>`__
   `Brodmann_MM <https://afni.nimh.nih.gov/pub/dist/atlases/Brodmann_MM>`__,`caez <https://afni.nimh.nih.gov/pub/dist/atlases/caez>`__,`caez_18_all_atlases.tgz <https://afni.nimh.nih.gov/pub/dist/atlases/caez_18_all_atlases.tgz>`__
   `cat <https://afni.nimh.nih.gov/pub/dist/atlases/cat>`__,`currentpmaps <https://afni.nimh.nih.gov/pub/dist/atlases/currentpmaps>`__,`dog <https://afni.nimh.nih.gov/pub/dist/atlases/dog>`__
   `elsedemo <https://afni.nimh.nih.gov/pub/dist/atlases/elsedemo>`__,`HaskinsPeds <https://afni.nimh.nih.gov/pub/dist/atlases/HaskinsPeds>`__,`IBT <https://afni.nimh.nih.gov/pub/dist/atlases/IBT>`__
   `JulichBrain <https://afni.nimh.nih.gov/pub/dist/atlases/JulichBrain>`__,`keuken <https://afni.nimh.nih.gov/pub/dist/atlases/keuken>`__,`macaque <https://afni.nimh.nih.gov/pub/dist/atlases/macaque>`__
   `marmoset <https://afni.nimh.nih.gov/pub/dist/atlases/marmoset>`__,`Mayo <https://afni.nimh.nih.gov/pub/dist/atlases/Mayo>`__,`MNI <https://afni.nimh.nih.gov/pub/dist/atlases/MNI>`__
   `MNI_2009c_atlases <https://afni.nimh.nih.gov/pub/dist/atlases/MNI_2009c_atlases>`__,`mni_acpc <https://afni.nimh.nih.gov/pub/dist/atlases/mni_acpc>`__,`MNI_atlases <https://afni.nimh.nih.gov/pub/dist/atlases/MNI_atlases>`__
   `MNIatlases.tgz <https://afni.nimh.nih.gov/pub/dist/atlases/MNIatlases.tgz>`__,`MNI_Desai <https://afni.nimh.nih.gov/pub/dist/atlases/MNI_Desai>`__,`MNI_HCP <https://afni.nimh.nih.gov/pub/dist/atlases/MNI_HCP>`__
   `MNI_VmPFC <https://afni.nimh.nih.gov/pub/dist/atlases/MNI_VmPFC>`__,`mouse <https://afni.nimh.nih.gov/pub/dist/atlases/mouse>`__,`NIHtoddler <https://afni.nimh.nih.gov/pub/dist/atlases/NIHtoddler>`__
   `old.atlases <https://afni.nimh.nih.gov/pub/dist/atlases/old.atlases>`__,`Pauli_subcortical <https://afni.nimh.nih.gov/pub/dist/atlases/Pauli_subcortical>`__,`Princeton_visual <https://afni.nimh.nih.gov/pub/dist/atlases/Princeton_visual>`__
   `rat <https://afni.nimh.nih.gov/pub/dist/atlases/rat>`__,`SchaeferYeo <https://afni.nimh.nih.gov/pub/dist/atlases/SchaeferYeo>`__,`SDSU4yearolds <https://afni.nimh.nih.gov/pub/dist/atlases/SDSU4yearolds>`__
   `SUIT_Cerebellum <https://afni.nimh.nih.gov/pub/dist/atlases/SUIT_Cerebellum>`__,`UNC_Infant_Atlases <https://afni.nimh.nih.gov/pub/dist/atlases/UNC_Infant_Atlases>`__,`VmPFC <https://afni.nimh.nih.gov/pub/dist/atlases/VmPFC>`__
   `waxrat <https://afni.nimh.nih.gov/pub/dist/atlases/waxrat>`__,

|
| The link to the "basic" webpage interface for downloading the above
  dsets is here:
| `<https://afni.nimh.nih.gov/pub/dist/atlases/>`_

|