AFNI program: @djunct_edgy_align_check
Output of -help
++ Environment variable AFNI_COMPRESSOR already set to 'NONE'. Value of 'GZIP' from /home/afniHQ/.afnirc is ignored.
To kill such warnings Set AFNI_ENVIRON_WARNINGS to NO
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OVERVIEW ~1~
More helpful helpfile description coming (some day...)
This is just a helper script for other things.
written by PA Taylor, modelled heavily on RW Cox's '@snapshot_volreg'
script
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COMMAND OPTIONS ~1~
-hview
-help
-ver
-echo
-ulay ULAY
-olay OLAY
-prefix PREFIX
-box_focus_slices DSET_BFS
-montgap MG
-montcolor MC
-cbar CBAR
-blowup BUFAC
-save_ftype FTYPE
-set_dicom_xyz XX YY ZZ
-ulay_range umin umax
-ulay_range_nz umin umax
-ulay_range_am umin umax
-umin_fac UF
-montx MX
-monty MY
-use_olay_grid INTERP
-label_mode LM
-sharpen_ulay_off
-mask_olay_edges
-no_cor
-no_sag
-no_axi
-no_clean
NOTES TO SELF ~1~
If using -box_focus_slices, don't use the AMASK_FOCUS_OLAY keyword,
but instead repeat the name of the olay explicitly. This is because
this program creates an edgified version of the olay, which gets
passed into @chauffeur_afni, and then using the AMASK* functionality
would try to 'automask' that dset, typically leaves no voxels and
leads to an error. Repeating the name of the input olay leads to
correct behavior. (Ask me how I discovered *this* tidbit of
knowledge?)
This page auto-generated on
Thu Oct 31 09:43:37 PM EDT 2024