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Script for
Deconvolution - 5
#======================================================================
# Now we can concatenate our
10 normalized runs with 3dTcat.
#======================================================================
3dTcat -prefix {$subj}_all_runs \
scaled_r1+orig scaled_r2+orig \
scaled_r3+orig scaled_r4+orig \
scaled_r5+orig scaled_r6+orig \
scaled_r7+orig scaled_r8+orig \
scaled_r9+orig scaled_r10+orig
#======================================================================
# move unneeded run data
into separate directories
#======================================================================
mkdir runs_orig
runs_temp
mv {$subj}_r*_vr* scaled*
runs_temp
mv {$subj}_r* runs_orig
ÒGluingÓ the runs together, since 3dDeconvolve only operates on one input dataset at a time
Gets this stuff out of the way so that we donÕt see it when we run AFNI later