¥ Script file decon_ht2 does the job:
¥3dDeconvolve -xout -input
rall_vr+orig
\
¥ -num_stimts 4
\
¥ -stim_file 1 stim_files/scan1to4a_hrf.1D -stim_label 1 Actions \
¥ -stim_file 2 stim_files/scan1to4t_hrf.1D -stim_label 2 Tool \
¥ -stim_file 3 stim_files/scan1to4h_hrf.1D -stim_label 3 HighC \
¥ -stim_file 4 stim_files/scan1to4l_hrf.1D -stim_label 4 LowC \
¥ -concat contrasts/runs.1D
\
¥ -glt 1 contrasts/contr_AvsT.txt -glt_label 1 AvsT
\
¥ -glt 1 contrasts/contr_HvsL.txt -glt_label 2 HvsL
\
¥ -glt 1 contrasts/contr_ATvsHL.txt -glt_label 3
ATvsHL
\
¥ -full_first -fout -tout
\
¥ -bucket func_ht2
¥ Run this script by typing source decon_ht2 (takes
a few minutes)
¥ Stim #1 = visual presentation of active
movements
¥ Stim #2 = visual presentation of simple
(tool-like) movements
¥ Stims #3 and #4 = high and low contrast
gratings