show volume in space - could have surfaces from freesurfer anat, strip datasets - multiple slices, rendering func_slim - range, threshold clusters in 3D IsoSurface -isorois+dsets -o clusttest.gii -input Clust_mask+orig suma -onestate -i *.gii -vol strip+orig. -sv anat+orig show atlas in suma mkdir atlassurfs cd atlassurfs IsoSurface -isorois+dsets -o TT_desai.gii -input ~/abin/TT_desai_dd_mpm+tlrc. \ -remesh 0.1 suma -onestate -i *.gii -vol ~/abin/TT_N27+tlrc. opacity, points -hiding mesh, some or all - exploring and limiting show atlas with volume slices, rendered volume talk to afni overlay, threshold - coefficients, tstat merged atlas rois connectivity - connections? Claustrum/roi extract - display a particular region Brain printing Acknowledgements in suma https://afni.nimh.nih.gov/afni/community/board/read.php?1,146293,146293 http://afni.nimh.nih.gov/sscc/staff/glend/collaborations/NIMLcontributors.tgz suma -gdset /home/dglen/macaque_connections/contributor_connections.niml.dset