title          :: Start to Finish Hands-On (9/17): volreg processing block
presentation   :: afni16_start_to_finish.pdf
scripts        :: shell_commands.txt
date           :: 2020-04
duration       :: 24:21
speaker        :: Reynolds
outline        ::
Processing: volreg block
Already figured out: anat/EPI and anat/template registration
+ now estimate EPI/EPI registration (min_outlier)
+ and concatenate and apply xforms
Plot motion parameters
View anat/EPI registration matrix
Review extents mask: mask of voxels with valid data across all time points
Note creation of final_epi, anat_final and anat_w_skull_warped dsets
In afni, view registered EPI time series
Need to resample when applying a transformation