#!/bin/tcsh -f

if ("$1" == "-clean") then
   \rm -f lh.OccROIs.1D.dset 
   \rm -f lh.OccROIs.niml.dset 
   \rm -f lh.BigROIs.niml.dset
   goto END
endif 

if ( ! -f lh.OccROIs.niml.roi || \
     ! -f lh.BigROIs.niml.roi ) then
     echo "Missing ROI files (lh.OccROIs.niml.roi and/or lh.BigROIs.niml.roi)."
     echo "They should have been in this archive. If you did not delete them"
     echo "by mistake, post a complaint on the AFNI"
     echo "message board"
     exit 1
endif

#Turn the ROIs you have created to a surface dataset
if ( ! -f lh.OccROIs.1D.dset) then
   ROI2dataset -prefix  lh.OccROIs.1D.dset    \
            -of      1D                 \
            -input   lh.OccROIs.niml.roi
else
   echo "Reusing lh.OccROIs.1D.dset"
endif            

#or use the better niml format
if ( ! -f lh.OccROIs.niml.dset) then
   ROI2dataset     \
            -label_dset  lh.OccROIs.niml.dset     \
            -input   lh.OccROIs.niml.roi
else
   echo "Reusing lh.OccROIs.niml.dset"
endif            
            
 
#Turn the other ROI to a dataset
if ( ! -f lh.BigROIs.niml.dset) then
   ROI2dataset -label_dset  lh.BigROIs.niml.dset    \
            -input   lh.BigROIs.niml.roi
else
   echo "Reusing lh.BigROIs.niml.dset"
endif            
            
END: