2)
Perform N3 Correction on each dataset with AFNI 3dUniformize
3dUniformize -anat <AFNI BRIK>
-prefix <pname> Class Example: (from within lc_play/ directory)
foreach x (1 2 3 4)
3dUniformize -quiet -anat mprage{$x}+orig \-prefix mprage{$x}_n3 end
Volume
preprocessing
Segmentation
Tessellation
Inflation
Manual Editing
Re-inflation
Fix topology
Final Surface
Volume/Surface
postprocessing
Cutting
&
Flattening