Manual editing and inflation steps should be repeated until all large topologic defects have been corrected.
From GUI:
SubjectTools ˆ Create Surface
From
Command Line: inflate_subject
<subject_name>
Class Example: (from within lc_play/ directory)
inflate_subject lc_avg
orÉ
recon-all -stage2 -subjid
lc_avg
Segmentation
Inflation
Manual Editing
Re-inflation
Fix topology
Final Surface
Volume/Surface
postprocessing