AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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mb
November 25, 2014 02:03PM
Thanks for the info. And yes - I meant that AFNI does per-voxel time series normalization, not normalizing all voxels. Most psychophysiological measures (e.g. ERPs, electrodermal, cardiac, etc.) use a baseline immediately preceding stimulus onset to control for things like local drift, habituation, etc even if changes are not huge. Even with what you have said here, it makes sense to me to use a local baseline for the same reason with fMRI. Most physiological systems will recover with 5-20 s, which is a typical inter-trial interval in BOLD studies. Having analyzed the same data both ways with little difference, I guess it would be safe to say one could use the local baseline, right? thanks, mb
Subject Author Posted

Normalization

mb November 20, 2014 08:57AM

Re: Normalization (in time)

Emperor Zhark November 20, 2014 10:20AM

Re: Normalization (in time)

mb November 25, 2014 02:03PM

Re: Normalization (in time)

rick reynolds December 01, 2014 11:56AM