AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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July 06, 2012 11:42AM
Hey there,

I have another question re: the 3dclustsim option in afni_proc.py. The default is to have it run and I assume it did that, since I didn't tell it not to. However, when I click on the Rpt button to see the cluster results, the alpha levels are all N/Csim, indicating that they are not available. This is true whether I look at individual subjects' results or the group level results. Did I do something wrong?

Also, is there a way to get an output file with the cluster sizes and corresponding alpha levels, such as you get when you run 3dclustsim separately as its own script?

Thanks mucho.
Subject Author Posted

3dclustsim question

lianablair July 06, 2012 11:42AM

Re: 3dclustsim question

rick reynolds July 06, 2012 12:18PM

Re: 3dclustsim question

lianablair July 06, 2012 02:40PM

Re: 3dclustsim question

rick reynolds July 06, 2012 04:33PM

Re: 3dclustsim question

rick reynolds July 06, 2012 09:36PM

Re: 3dclustsim question

lianablair July 12, 2012 02:39PM

Re: 3dclustsim question

lianablair July 13, 2012 04:24PM

Re: 3dclustsim question

rick reynolds July 14, 2012 11:20AM

Re: 3dclustsim question

rick reynolds July 14, 2012 11:23AM

Re: 3dclustsim question

lianablair July 18, 2012 04:35PM

Re: 3dclustsim question

rick reynolds July 18, 2012 08:55PM