Hello,

I've just started using Dimon instead of to3d to convert dicom files to Briks (a new naming convention of the dicom files requires us to organize them with the -dicom_org flag), and I am currently using the following command for my functional runs:

Dimon -dicom_org -sp [slice pattern] -num_slices [Slices] -nt [volumes per run] -tr [TR] -no_wait -infile_prefix [Prefix] -gert_create_dataset -gert_outdir [Output dir] -gert_to3d_prefix [Prefix]

This seems to work well, but I am wondering if there is a way to automatically save outliers in a 1D file? With to3d, we would use the flag -save_outliers. I see I could manually add that flag to the to3d command within the GERT_Reco script that is generated for every run, but I'd rather be able to do it automatically within the Dimon command. I've also tried using 3dToutcount as an alternative, but that seemed to give me somewhat different results than the to3d -save_outliers flag on the same dataset.

Thanks for the help,
Miranda