Most Merciful Emperor Zhark,

1dplot is behaving strangely. I've got several reports to make, only one of which I actually looked for in the source code:

First, the y axis is getting pushed any time there is more than one box, even if the -yaxis option has been given. The -nopush option only makes things weirder:

1dplot -yaxis 0:.15:1:1 '1D:0 0'    #works
1dplot -yaxis -one 0:.15:1:1 '1D:0 0' '1D:0 0'    #works
1dplot -yaxis 0:.15:1:1 '1D:0 0' '1D:0 0'    #y axis from 0 to .16
1dplot -yaxis 0:.15:1:1 -nopush '1D:0 0'    #works
1dplot -yaxis 0:.15:1:1 -nopush '1D:0 0' '1D:0 0'    #y axis from -7.50E-04 to .151, tick marks everywhere!

This looks like it might come from the variable yall in function plot_ts_mem() in coxplot/plot_ts.c, which gets set to 1 in precisely the cases where the push happens, but I haven't been able to isolate what's going on-- it seems like the loop at line 360 of coxplot/plot_ts.c is a duplicate of part of the ypush code, but if that's the problem I can't figure out why it works when there's only one plot box.

The second weirdness has to do with the new(?) and very cool -censor* options. There seems to be some interaction between using * as a run index in -CENSORTR and the various label and axis options which causes 1dplot to censor with strange colors:

1dplot -concat '1D:0 3' -CENSORTR '1:0-1,2:0-1' - '1D:0 0 0 0 0 0'    #works
1dplot -concat '1D:0 3' -CENSORTR '*:0-1' - '1D:0 0 0 0 0 0'    #censors in black
1dplot -plabel '' -concat '1D:0 3' -CENSORTR '*:0-1' - '1D:0 0 0 0 0 0'    #censors the first block in black, the second in blue
1dplot -plabel '' -concat '1D:0 3' -CENSORTR '*:0-1,*:0-1' - '1D:0 0 0 0 0 0'    #censors the first block in black, the second in green

Setting -censor_RGB has no effect when the colors are scrambled.

Additionally, giving more than one -censor option results in discarding all but the last; this is consistent with 3dDeconvolve but it could be clearer in 1dplot -help that that's the program's intended behavior, since the help on -censor is immediately preceded by a section on cool things you can do with multiple -censor and/or -CENSORTR options.

I've been pushing lately to make quality-checking my data easier, and the -censor options on 1dplot make me very happy. Thanks much for adding them and hope this helps!

Isaac

UPDATE: Commenting out lines 360-377 of coxplot/plot_ts.c and rebuilding did indeed make -yaxis work.



Edited 1 time(s). Last edit at 10/10/2012 05:12PM by Isaac Schwabacher.