AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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January 15, 2013 11:05AM
Dear all,
I want to compare the two approaches:
Approach 1: threshold and clusterize at the individual level and then do group level analysis
Approach 2: threshold and clusterize at the group level directly

In general, is one of these better than the other?

About clusterization at the group level - should we average the errts files across subjects and run 3dFWHMx on the resulting avg_errts to get the group-level blur estimate and feed that to 3dClustSim to get the group-level cluster threshold? Or should we just average the individual blur estimates and feed that average to 3dFWHMx? The former sounds like the correct approach for the following reason: When we average the signal across several subjects, we average out the noise and hence the chances of having a noise-cluster at the group level must be lower that the chances of having a noise-cluster at individual level. Hence, we should average the errts files and not just the individual blurs.

Is this understanding correct?

This will be great help!
Best,
Gaurav
Subject Author Posted

basic questions about clusterization at group level

gauravm January 15, 2013 11:05AM

Re: basic questions about clusterization at group level

rick reynolds January 15, 2013 08:50PM