Hi -
1. I ran 3dDeconvolve (using Block) with 3 conditions: A,B,C and got 3 beta coefficients for each of 24 subjects that I then tested using 3dAnova2.
2. Then, I ran 3dDeconvolve (using Block) on the same data with 2 conditions: B, and A/C together. Then I tested these 2 beta coefficients with 3dAnova2.
My confusion is this: The maps for the condition that I did NOT change (B) are different in the 2 analyses. I can understand that error terms etc. change in the ANOVA, and perhaps things are also different in 3dDeconvolve, but I just wondered if you could enlighten me any further? thanks, mb