AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

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PeterK
August 02, 2014 01:21PM
Has anyone had sucess implementing complex align_epi_anat commands within afni.prof.py?

Does afni.proc.py take dset1 and dset2 arguments and align dset2to1 and child epi commands? I have found those arguments work well as a stand alone align_epi_anat.py script - but I can't seem to get them built into afni.proc.py.

I want to align anat to anat and child epi within afni.proc.py on a session by session basis.

Let me know if you have any advice or are willing to share an example.

Thanks, Peter
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Subject Author Posted

complex align_epi_anat commands within afni.proc.py

PeterK August 02, 2014 01:21PM

Re: complex align_epi_anat commands within afni.proc.py

rick reynolds August 03, 2014 08:49PM

Re: complex align_epi_anat commands within afni.proc.py

PeterK August 04, 2014 08:44AM

Re: complex align_epi_anat commands within afni.proc.py

PeterK August 04, 2014 08:57AM

Re: complex align_epi_anat commands within afni.proc.py

rick reynolds August 04, 2014 03:43PM