AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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December 28, 2014 03:35PM
Hello AFNI members and Users,

My earlier problem of AFNi installation still persist [which is 'Badly placed ()'s' ]. So I decided to change user and downloaded and extracted the afni files using instructions on beginners manual. Everything went well till rehash step, however when I type afni I get : afni: Command not found.

So looked into previous post and found one thread not exactly related but some commands which seemed useful:
echo $0
echo $PATH
cd
abin/afni -ver
grep abin .cshrc
echo shell is $0
grep abin .bash*
. ~/.profile

**********
Last login: Sun Dec 28 14:25:39 on ttys000
[rmbp:~] Raj% echo $0
-tcsh
[rmbp:~] Raj% echo $PATH
/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/bin:/opt/X11/bin:/Users/Raj/abin:/Users/Raj/abin
[rmbp:~] Raj% ls abin
macosx_10.7_Intel_64
[rmbp:~] Raj% cd
rmbp:~] Raj% abin/afni -ver
abin/afni: Command not found

[rmbp:~] Raj% grep abin .cshrc
set path = ( $path $HOME/abin )
setenv DYLD_FALLBACK_LIBRARY_PATH $HOME/abin
set path = ( $path $HOME/abin )
setenv DYLD_FALLBACK_LIBRARY_PATH $HOME/abin
[rmbp:~] Raj% grep abin .bash*
[rmbp:~] Raj% . ~/.profile
.: Command not found.

Will someone tell me what else do I need to do? I downloaded X11 quartz (XQuartz 2.7.7 (xorg-server 1.15.2))

Thanks and regards,

Sampada
Subject Author Posted

Regarding: AFNI installation

Sampada December 28, 2014 03:35PM

Re: Regarding: AFNI installation

rick reynolds December 28, 2014 04:06PM

Re: Regarding: AFNI installation

Sampada December 28, 2014 05:16PM

Re: Regarding: AFNI installation

Sampada December 28, 2014 05:22PM

Re: Regarding: AFNI installation

rick reynolds December 29, 2014 08:33AM