AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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June 16, 2015 09:37PM
Hi,

I ran 3dREMLfit using the proc_afni.py script:

3dREMLfit -matrix X.xmat.1D -input pb04.Imagination001.r01.scale+orig.HEAD \
-fout -tout -Rbuck stats.Imagination001_REML -Rvar stats.Imagination001_REMLvar \
-Rfitts fitts.Imagination001_REML -Rerrts errts.Imagination001_REML -verb $*

Now, I want to know if it is possible to get the value of the (usually uninteresting term) intercept in the linear model (beta0) inside the mask.

Is there a function I can look at to do this? Or is this information somewhere in the many files that have been created so far? If so, how is this extracted?

Many thanks again!

Best wishes,
Ranjan
Subject Author Posted

is it possible to obtain the intercept coefficient estimates from the output of 3dREMLfit

maitra June 16, 2015 09:37PM

Re: is it possible to obtain the intercept coefficient estimates from the output of 3dREMLfit

gang June 17, 2015 10:37AM

Re: is it possible to obtain the intercept coefficient estimates from the output of 3dREMLfit

maitra June 17, 2015 03:49PM

Re: is it possible to obtain the intercept coefficient estimates from the output of 3dREMLfit

gang June 18, 2015 10:44AM