AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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December 16, 2015 12:03PM
Hi,

I am trying my luck with learning to use AFNI to postprocess and accquire resting state data (for further analysis and methodological developent using C and R codes) and I think I got things to work. My question is: is it possible to get the registered anatomical data (of the same volume dimensions) as the registered, normalized, etc. EPI image for the resting data. Here is a list of files that AFNI createsL:

all_runs.0050772+tlrc.HEAD* mprage_ns+tlrc.HEAD*
anat_final.0050772+tlrc.HEAD* mprage+orig.HEAD*
errts.0050772+tlrc.HEAD* pb00.0050772.r01.tcat+orig.HEAD*
fitts.0050772+tlrc.HEAD* pb01.0050772.r01.despike+orig.HEAD*
full_mask.0050772+tlrc.HEAD* pb02.0050772.r01.tshift+orig.HEAD*
mask_anat.0050772+tlrc.HEAD* pb03.0050772.r01.volreg+tlrc.HEAD*
mask_epi_extents+tlrc.HEAD* pb04.0050772.r01.blur+tlrc.HEAD*
mprage_al_junk+orig.HEAD* stats.0050772+tlrc.HEAD*
mprage_ns+orig.HEAD* TSNR.0050772+tlrc.HEAD*

Would any one of these be registered anatomic images of the same volumetric dimenstions as the registred epi functional MR images (which have

Many thanks,
Ranjan
Subject Author Posted

extracting the registered Talaraiched anatomical image volume with AFNI

maitra December 16, 2015 12:03PM

Re: extracting the registered Talaraiched anatomical image volume with AFNI

Peter Molfese December 16, 2015 12:22PM

Re: extracting the registered Talaraiched anatomical image volume with AFNI

maitra December 16, 2015 06:39PM