AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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April 10, 2016 09:19AM
Hi ,
I need to transform MIN to TLRC coordinates.But the results of 3 distinct methods were so different:
1.I clicked 'jump to MNI' and entered '21 32 11' in the image window of GUI. Then I opened the window of 'where am I ?' .
Words outputted in this window were:
Focus point (LPI)=
20 mm[R],28mm[A],16mm[s] {TLRC}
21 mm[R],32mm[A],11mm[s] {MNI}

2. Entered 'whereami -lpi -space MNI 21 32 11 ' in the terminal,the outputs were:

Focus point (LPI)=
-21 mm [L], -32 mm [P], 11 mm [S] {TLRC}
-21 mm [L], -34 mm [P], 10 mm [S] {MNI}

3.Entered 'whereami -lpi -space MNI 21 32 11 -calc_chain MNI TLRC -xform_xyz_quiet' in the terminal,the outputs were:
20.790001, 30.495600, 11.659900
So why was the outputs so different?How to transform from MIN coordinates to TLRC using afni code without unnecessary outputs?
Thank you!
Subject Author Posted

Why are the corresponding relationships of coordinates between MIN and TLRC different?

Jogi Ho April 10, 2016 09:19AM

Re: Why are the corresponding relationships of coordinates between MIN and TLRC different?

Daniel Glen April 11, 2016 12:11PM

Re: Why are the corresponding relationships of coordinates between MIN and TLRC different?

Jogi Ho April 12, 2016 12:16AM

Re: Why are the corresponding relationships of coordinates between MIN and TLRC different?

Daniel Glen April 12, 2016 07:19AM

Re: Why are the corresponding relationships of coordinates between MIN and TLRC different?

Jogi Ho April 12, 2016 09:39AM

Re: Why are the corresponding relationships of coordinates between MIN and TLRC different?

Daniel Glen April 12, 2016 08:58PM

Re: Why are the corresponding relationships of coordinates between MIN and TLRC different?

Ren Po April 13, 2016 08:58AM