AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

Previous Message Next Message
Message List New Topic Print View
|
heenam
May 06, 2017 08:18PM
Hello,

I am getting the following error when running the @auto_tlrc script:

3dNotes -h "align_epi_anat.py -anat MPRAGE.nii -epi \
/Users/manglani.2/Data/BAMMS/BAM005/Rest/GTG/4D.nii -epi_base 0 -epi2anat \
-prep_off -partial_axial -anat_has_skull no -epi_strip 3dAutomask \
-master_tlrc 2.0 -tlrc_apar MPRAGE_TLR.nii -suffix _tlrcMNI.nii" \
./4D_tlrcMNI.nii+orig

Error: Cannot open dataset
#++ Removing all the temporary files
#Script is running:
\rm -f ./__tt_4D*
#Script is running:
\rm -f ./__tt_MPRAGE*

All file permissions have been set to -rwx. Any troubleshooting steps would be greatly appreciated!

Thanks!
Heena
Reply Quote
RSS
Subject Author Posted

@auto_tlrc, Cannot open dataset

heenam May 06, 2017 08:18PM

Re: @auto_tlrc, Cannot open dataset

rick reynolds May 08, 2017 08:34AM

Re: @auto_tlrc, Cannot open dataset

rick reynolds May 08, 2017 10:42AM

Re: @auto_tlrc, Cannot open dataset

heenam May 09, 2017 08:02PM

Re: @auto_tlrc, Cannot open dataset

rick reynolds May 09, 2017 08:39PM

Re: @auto_tlrc, Cannot open dataset

rick reynolds May 16, 2017 01:16PM

Re: @auto_tlrc, Cannot open dataset

rick reynolds May 16, 2017 01:47PM