AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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September 05, 2017 11:49PM
Hi all!

I am creating macaque topology using macaque_align.csh.
In the README_AFNI.txt of macaqueatlas_1.2a, there is an example as below.

EX: tcsh -x ../macaque_align.csh macaque1+orig ../../D99_template.nii.gz \
../../D99_atlas_1.2a.nii.gz ../../D99_atlas_1.2a_right.nii.gz | & tee test1.log

We are calculating only right. Do you have to calculate the left side separately after the right side calculation is done?

Thank you in advance to whomever can help! I'm pretty new, so any advice will help.

M-K
Subject Author Posted

Question about macaque_align.csh in macaqueatlas_1.2a?

bspect September 05, 2017 11:49PM

Re: Question about macaque_align.csh in macaqueatlas_1.2a?

Daniel Glen September 13, 2017 01:38PM