Hi all,
I found a very odd problem. I tried two different ways to generate the suma folder for surface based analysis.
One is:
@SUMA_Make_Spec_FS -sid $subj -fspath $SUBJECTS_DIR/$subj/
The other one is:
@SUMA_Make_Spec_FS -fspath $SUBJECTS_DIR/$subj/ -sid $subj -NIFTI
So the only difference here is the -NIFTI option.
Then I compared the files with the same name (they are supposed to be the same file but in different format) like Sub01_TPL_SurfVol+orig.BRIK/HEAD and Sub01_TPL_SurfVol.nii. But a very fantastic thing happened! They are misaligned with each other...
I'm totally confused now. Please could someone help with this question?
Many thanks,
Sarah
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