Hello folks,
I was happily testing the multiecho combine method, OC_tedort when I ran into an issue during the regression stage:
[7m** ERROR:[0m !! 3dDeconvolve: Can't run past 5 matrix warnings without '-GOFORIT 5'
which was new. I believe the only change was to apply motion regressors per run. The error itself comes from here,
++ Wrote matrix values to file X.nocensor.xmat.1D
[7m*+ WARNING:[0m -------------------------------------------------
[7m*+ WARNING:[0m Problems with the X matrix columns, listed below:
[7m*+ WARNING:[0m !! * Columns 107 [morts_r02[3]#0] and 208 [morts_r02[104]#0] are (nearly?) collinear!
[7m*+ WARNING:[0m !! * Columns 112 [morts_r02[8]#0] and 211 [morts_r02[107]#0] are (nearly?) collinear!
[7m*+ WARNING:[0m -------------------------------------------------
I investigated these multiecho derived orts (morts
is a nice name) and they are not just nearly collinear, they are absolutely identical. This is both before and after projecting out the good components.
is it a problem with the (large) number of regressors leading to some strange wrap around? The first run did not report any problems, but had a smaller number of regressors.
Also, would this large number of regressors (203, but total timepoints = 890) be expected slow down the 3dREML voxel loop?
Thanks for the work on multiecho! Let me know if there are any particular details you would like to see.