AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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mri
August 02, 2018 07:53PM
Hi,

I was wondering when should despiking be performed when analyzing resting-state data. Should it be done at the end of preprocessing or right at the beginning? I also wonder how 3dDespike relates to the wavelet algorithm proposed by Patel et. al (2014). In their paper they say "This is in contrast to the Time Despike, and other sinusoidal curve fitting or tanh functions (such as AFNI's 3dDespike) for despiking time series, which will only be effective at isolating high frequency events, and will interpolate spikes with a value calculated form the surrounding time points or from a fitted curve. Additionally, these interpolating algorithms may not always correctly identify movement artifacts...". Are these limitations still true in the current version of 3dDespike?
Thanks.
Subject Author Posted

3dDespike questions

mri August 02, 2018 07:53PM

Re: 3dDespike questions

rick reynolds August 06, 2018 09:53AM

Re: 3dDespike questions

mri August 06, 2018 10:42PM