AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

Previous Message Next Message
Message List New Topic Print View
|
amenyoawudepe
August 01, 2019 03:59PM
Dear AFNI community:
I'm running my first 3dANOVA3 script (or at least trying to) and I received the following error messages:

Fatal Signal 11 (SIGSEGV) received
3dANOVA3 main
Bottom of Debug Stack
** Command line was:
3dANOVA3 -type 5
** AFNI version = AFNI_19.2.07 Compile date = Jul 30 2019
** [[Precompiled binary linux_openmp_64: Jul 30 2019]]
** Program Death **
** If you report this crash to the AFNI message board,
** please copy the error messages EXACTLY, and give
** the command line you used to run the program, and
** any other information needed to repeat the problem.
** You may later be asked to upload data to help debug.
** Crash log is appended to file /home/amenyoawudepe/.afni.crashlog
[amenyoawudepe@ndsw-hmcs-agency scripts]> -alevels 2\
>
bash: -alevels: command not found
,and it continues as such all the way down

This is the script I am trying to run

3dANOVA3 -type 5\
-alevels 2\
-blevels 2\
-clevels 15\
-dset 1 1 1 HV01_3T_Y0+tlrc\
-dset 1 2 1 HV01_3T_Y1+tlrc\
-dset 1 1 2 HV02_3T_Y0+tlrc\
-dset 1 2 2 HV02_3T_Y1+tlrc\
-dset 1 1 3 HV03_3T_Y0+tlrc\
-dset 1 2 3 HV03_3T_Y1+tlrc\
-dset 1 1 4 HV06_3T_Y0+tlrc\
-dset 1 2 4 HV06_3T_Y1+tlrc\
-dset 1 1 5 HV07_3T_Y0+tlrc\
-dset 1 2 5 HV07_3T_Y1+tlrc\
-dset 2 1 6 PD02_3T_Y0+tlrc\
-dset 2 2 6 PD02_3T_Y1+tlrc\
-dset 2 1 7 PD03_3T_Y0+tlrc\
-dset 2 2 7 PD03_3T_Y1+tlrc\
-dset 2 1 8 PD04_3T_Y0+tlrc\
-dset 2 2 8 PD04_3T_Y1+tlrc\
-dset 2 1 9 PD07_3T_Y0+tlrc\
-dset 2 2 9 PD07_3T_Y1+tlrc\
-dset 2 1 10 PD08_3T_Y0+tlrc\
-dset 2 2 10 PD08_3T_Y1+tlrc\
-dset 2 1 11 PD09_3T_Y0+tlrc\
-dset 2 2 11 PD09_3T_Y1+tlrc\
-dset 2 1 12 PD10_3T_Y0+tlrc\
-dset 2 2 12 PD10_3T_Y1+tlrc\
-dset 2 1 13 PD15_3T_Y0+tlrc\
-dset 2 2 13 PD15_3T_Y1+tlrc\
-dset 2 1 14 PD19_3T_Y0+tlrc\
-dset 2 2 14 PD19_3T_Y1+tlrc\
-dset 2 1 15 PD21_3T_Y0+tlrc\
-dset 2 2 15 PD21_3T_Y1+tlrc\
-adiff 1 2 HVvsPD\
-bdiff 1 2 Y0vsY1\
-bucket HV_n_PD_anova

Is there anything I am doing wrong, or anything I am missing?
Reply Quote
RSS
Subject Author Posted

3dANOVA3 help

amenyoawudepe August 01, 2019 03:59PM

Re: 3dANOVA3 help

rick reynolds August 01, 2019 05:02PM