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lxykh
September 24, 2019 01:44PM
Hi,
I'm getting more than expected number of coeffs output by 3ddeconvolve, and I'm wondering why.
See a sample code below. If I understand AM2 and stim_time correctly, I should get 3 coeffs from the AM2 stim times as they have 2 rating values at each time point, and 1 coeff from regular stim times. But I'm getting 5 for AM2 stim times and 2 for regular ones and I'm wondering why this is happening? Thanks!

3dDeconvolve -input pb06.$subj.r*.scale+tlrc.HEAD \
-censor censor_${subj}_combined_2.1D \
-ortvec meica_orts/morts_r01.1D morts_r01 \
-ortvec meica_orts/morts_r02.1D morts_r02 \
-ortvec meica_orts/morts_r03.1D morts_r03 \
-ortvec meica_orts/morts_r04.1D morts_r04 \
-ortvec meica_orts/morts_r05.1D morts_r05 \
-ortvec meica_orts/morts_r06.1D morts_r06 \
-ortvec mot_demean.r01.1D mot_demean_r01 \
-ortvec mot_demean.r02.1D mot_demean_r02 \
-ortvec mot_demean.r03.1D mot_demean_r03 \
-ortvec mot_demean.r04.1D mot_demean_r04 \
-ortvec mot_demean.r05.1D mot_demean_r05 \
-ortvec mot_demean.r06.1D mot_demean_r06 \
-ortvec mot_deriv.r01.1D mot_deriv_r01 \
-ortvec mot_deriv.r02.1D mot_deriv_r02 \
-ortvec mot_deriv.r03.1D mot_deriv_r03 \
-ortvec mot_deriv.r04.1D mot_deriv_r04 \
-ortvec mot_deriv.r05.1D mot_deriv_r05 \
-ortvec mot_deriv.r06.1D mot_deriv_r06 \
-polort 5 \
-num_stimts 9 \
-stim_times_AM2 1 stimuli/101_Fstim_sepRating_married.1D 'SPMG2' \
-stim_label 1 Fstim \
-stim_times_AM2 2 stimuli/101_Kstim_sepRating_married.1D 'SPMG2' \
-stim_label 2 Kstim \
-stim_times_AM2 3 stimuli/101_Sstim_married.1D 'SPMG2' \
-stim_label 3 Sstim \
-stim_times 4 stimuli/101_timing.Frating1.1D 'SPMG2' \
-stim_label 4 Frating1 \
-stim_times 5 stimuli/101_timing.Krating1.1D 'SPMG2' \
-stim_label 5 Krating1 \
-stim_times 6 stimuli/101_timing.Srating1.1D 'SPMG2' \
-stim_label 6 Srating1 \
-stim_times 7 stimuli/101_timing.Frating2.1D 'SPMG2' \
-stim_label 7 Frating2 \
-stim_times 8 stimuli/101_timing.Krating2.1D 'SPMG2' \
-stim_label 8 Krating2 \
-stim_times 9 stimuli/101_timing.fix.1D 'SPMG2' \
-stim_label 9 fix \
-iresp 1 iresp_Fstim.$subj \
-iresp 2 iresp_Kstim.$subj \
-iresp 3 iresp_Sstim.$subj \
-iresp 4 iresp_Frating1.$subj \
-iresp 5 iresp_Krating1.$subj \
-iresp 6 iresp_Srating1.$subj \
-iresp 7 iresp_Frating2.$subj \
-iresp 8 iresp_Krating2.$subj \
-iresp 9 iresp_fix.$subj \
-fout -tout -x1D X.xmat.1D -xjpeg X.jpg \
-x1D_uncensored X.nocensor.xmat.1D \
-fitts fitts.$subj \
-errts errts.${subj} \
-bucket stats.$subj



Edited 1 time(s). Last edit at 09/24/2019 01:50PM by lxykh.
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Subject Author Posted

3ddeconvolve stats output

lxykh September 24, 2019 01:44PM

Re: 3ddeconvolve stats output

rick reynolds September 24, 2019 01:59PM

Re: 3ddeconvolve stats output

lxykh September 24, 2019 02:05PM

Re: 3ddeconvolve stats output

rick reynolds September 24, 2019 02:11PM