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Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

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georgehe
November 20, 2019 10:17AM
Hi AFNI experts,

I have a Mac mini with new installation of Catalina. I downloaded the precompiled macos_10.12_local.tgz and unpacked it to /usr/local/.
When I try to start afni, this is what I get. Please help.

Fatal Signal 11 (SIGSEGV) received
ISQ_record_button
open_MCW_imseq
SPLASH_popup_image
AFNI_splashup
MAIN_workprocess
AFNI:main
Bottom of Debug Stack
** AFNI version = AFNI_19.3.13 Compile date = Nov 19 2019
** [[Precompiled binary macos_10.12_local: Nov 19 2019]]
** Program Death **
** If you report this crash to the AFNI message board,
** please copy the error messages EXACTLY, and give
** the command line you used to run the program, and
** any other information needed to repeat the problem.
** You may later be asked to upload data to help debug.
** Crash log is appended to file /Users/hnladmin/.afni.crashlog

And here is what in the crashlog:*********------ CRASH LOG ------------------------------***********
Fatal Signal 11 (SIGSEGV) received
.......... recent internal history .........................................
-------AFNI_process_environ [7]: EXIT} (file=afni_environ.c line=175) to open_MCW_imseq {84 ms}
+++++++mri_free [7]: {ENTRY (file=mri_free.c line=49) from open_MCW_imseq {84 ms}
mri_free -- call killpurge {84 ms}
++++++++mri_killpurge [8]: {ENTRY (file=mri_purger.c line=259) from mri_free {84 ms}
mri_killpurge -- check if im==NULL ptr=0x7fbaf3406e20
mri_killpurge -- can't killpurge NULL fname! {84 ms}
--------mri_killpurge [8]: EXIT} (file=mri_purger.c line=270) to mri_free {84 ms}
mri_free -- free ptr {84 ms}
mri_free -- free im {84 ms}
-------mri_free [7]: EXIT} (file=mri_free.c line=67) to open_MCW_imseq {84 ms}
+++++++AFNI_process_environ [7]: {ENTRY (file=afni_environ.c line=155) from open_MCW_imseq {84 ms}
++++++++AFNI_suck_file [8]: {ENTRY (file=afni_environ.c line=64) from AFNI_process_environ {84 ms}
--------AFNI_suck_file [8]: EXIT} (file=afni_environ.c line=73) to AFNI_process_environ {84 ms}
-------AFNI_process_environ [7]: EXIT} (file=afni_environ.c line=175) to open_MCW_imseq {84 ms}
+++++++AFNI_process_environ [7]: {ENTRY (file=afni_environ.c line=155) from open_MCW_imseq {84 ms}
++++++++AFNI_suck_file [8]: {ENTRY (file=afni_environ.c line=64) from AFNI_process_environ {84 ms}
--------AFNI_suck_file [8]: EXIT} (file=afni_environ.c line=73) to AFNI_process_environ {84 ms}
-------AFNI_process_environ [7]: EXIT} (file=afni_environ.c line=175) to open_MCW_imseq {84 ms}
+++++++AFNI_process_environ [7]: {ENTRY (file=afni_environ.c line=155) from open_MCW_imseq {84 ms}
++++++++AFNI_suck_file [8]: {ENTRY (file=afni_environ.c line=64) from AFNI_process_environ {84 ms}
--------AFNI_suck_file [8]: EXIT} (file=afni_environ.c line=73) to AFNI_process_environ {84 ms}
-------AFNI_process_environ [7]: EXIT} (file=afni_environ.c line=175) to open_MCW_imseq {84 ms}
+++++++AFNI_process_environ [7]: {ENTRY (file=afni_environ.c line=155) from open_MCW_imseq {90 ms}
++++++++AFNI_suck_file [8]: {ENTRY (file=afni_environ.c line=64) from AFNI_process_environ {90 ms}
--------AFNI_suck_file [8]: EXIT} (file=afni_environ.c line=73) to AFNI_process_environ {90 ms}
-------AFNI_process_environ [7]: EXIT} (file=afni_environ.c line=175) to open_MCW_imseq {90 ms}
+++++++AFNI_process_environ [7]: {ENTRY (file=afni_environ.c line=155) from open_MCW_imseq {90 ms}
++++++++AFNI_suck_file [8]: {ENTRY (file=afni_environ.c line=64) from AFNI_process_environ {90 ms}
--------AFNI_suck_file [8]: EXIT} (file=afni_environ.c line=73) to AFNI_process_environ {90 ms}
-------AFNI_process_environ [7]: EXIT} (file=afni_environ.c line=175) to open_MCW_imseq {90 ms}
+++++++ISQ_record_button [7]: {ENTRY (file=imseq.c line=10986) from open_MCW_imseq {91 ms}
............................................................................
ISQ_record_button
open_MCW_imseq
SPLASH_popup_image
AFNI_splashup
MAIN_workprocess
AFNI:main
** AFNI compile date = Nov 19 2019
** [[Precompiled binary macos_10.12_local: Nov 19 2019]]
** Program Crash **

Thanks,
George
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Subject Author Posted

macos_10.12_local on Catalina

georgehe November 20, 2019 10:17AM

Re: macos_10.12_local on Catalina

ptaylor November 20, 2019 11:43AM

Re: macos_10.12_local on Catalina

georgehe November 20, 2019 03:19PM

Re: macos_10.12_local on Catalina

ptaylor November 20, 2019 03:23PM