AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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September 19, 2018 07:32PM
Hello,

I have installed ubuntu alongside my windows 10 computer using the Windows Subsystem for Linux. I have successfully installed afni and the afni commands. However, any time I attempt to execute an afni command I receive an error that the command can't be found.

DESKTOP-U4H41O9:~> ./3dcalc
./3dcalc: Command not found.

However, as you can see below my computer does have the afni command 3dcalc?
DESKTOP-U4H41O9:/mnt/e/scripts/scripts_home> which 3dcalc
/home/daniel/abin/3dcalc

Also when trying to execute a .sh file for a script I made that works fine on the mac we have in the lab I receive the error message....
DESKTOP-U4H41O9:/mnt/e/scripts/scripts_home> ./dtifit.sh
complete: Command not found.
complete: Command not found.
complete: Command not found.
complete: Command not found.
complete: Command not found.
complete: Command not found.
complete: Command not found.
complete: Command not found.
complete: Command not found.
complete: Command not found.
complete: Command not found.
complete: Command not found.
complete: Command not found.
Word too long.

Thank you for any advice you can provide,
Daniel
Subject Author Posted

Command not found for afni commands

Daniel2442 September 19, 2018 07:32PM

Re: Command not found for afni commands

rick reynolds September 19, 2018 10:12PM

Re: Command not found for afni commands

cktisch February 11, 2020 02:51PM

Re: Command not found for afni commands

ptaylor February 11, 2020 10:30PM