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Dear AFNI users-
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Sincerely, AFNI HQ
We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:
https://discuss.afni.nimh.nih.gov
Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.
The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.
Sincerely, AFNI HQ
| February 28, 2020 09:00AM | |
Hello !
I’m having a trouble using ClustSim command. I have a fatal error : unable to open file .//Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/afni_programs/results_age_RDx//stats.ttest.0000.sdat for output. I went looking on internet but found nothing. My lab mates don’t know how to solve it neither. I’ll send you the console content and the file containing the commands hoping you could sort this out. I first thought it was a permission issue so I gave it sudo access but I didn’t work.
Thank you for you help :)
sudo tcsh /Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/afni_programs/test_afni_paul_age-RDx.txt
Password:
++ 3dttest++: AFNI version=AFNI_20.0.14 (Feb 22 2020) [64-bit]
++ Authored by: Zhark++
++ Number of -Clustsim threads set to 12
+ Default clustsim prefix set to '/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/afni_programs/results_age_RDx//stats.ttest'
++ 1062762 voxels in -mask dataset
++ Covariates file: 3 columns, each with 40 rows
+ Covariate column labels: subjects;Age;RD_x
+ Found 2 numeric columns: Age RD_x
++ option -setA :: processing as LONG form (label label dset label dset ...)
++ have 40 volumes corresponding to option '-setA'
++ option -setB :: processing as LONG form (label label dset label dset ...)
++ have 40 volumes corresponding to option '-setB'
++ paired test: results will be anterior - posterior
++ loading covariates
++ Two samples: t-testing fixed covariates for similarity between groups
+ Age: mean of setA-setB=0 ; 2-sided p-value=1.0000
+ RD_x: mean of setA-setB=0 ; 2-sided p-value=1.0000
++ loading -setA datasets
++ loading -setB datasets
++ t-testing:0123456789.0123456789.0123456789.0123456789.0123456789.!
++ ---------- End of analyses -- freeing workspaces ----------
++ Creating FDR curves in output dataset
++ Smallest FDR q [1 anterior-posterior_Zscr] = 1.44412e-13
*+ WARNING: Smallest FDR q [3 anterior-posterior_Age_Zscr] = 0.301255 ==> few true single voxel detections
*+ WARNING: Smallest FDR q [5 anterior-posterior_RD_x_Zscr] = 0.928554 ==> few true single voxel detections
++ Smallest FDR q [7 anterior_Zscr] = 7.33319e-14
*+ WARNING: Smallest FDR q [9 anterior_Age_Zscr] = 0.522571 ==> few true single voxel detections
*+ WARNING: Smallest FDR q [11 anterior_RD_x_Zscr] = 0.99987 ==> few true single voxel detections
++ Smallest FDR q [13 posterior_Zscr] = 1.04128e-13
*+ WARNING: Smallest FDR q [15 posterior_Age_Zscr] = 0.824983 ==> few true single voxel detections
*+ WARNING: Smallest FDR q [17 posterior_RD_x_Zscr] = 0.799738 ==> few true single voxel detections
+ Added 9 FDR curves to dataset
++ Output dataset /Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/afni_programs/results_age_RDx//stats.ttest.resid.nii
+ paired test: results are anterior - posterior
++ ================ Starting -ClustSim calculations ================
+ === temporary files will have prefix /Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/afni_programs/results_age_RDx//stats.ttest ===
+ === running 12 -randomsign jobs (834 iterations per job) ===
+ === creating 21,255,240,000 (21 billion) bytes of pseudo-data in .sdat files ===
+ --- 3dClustSim reads .sdat files to compute cluster-threshold statistics ---
+ --- there is 17,179,869,184 (17 billion) bytes of memory on your system ---
*+ WARNING: --- runs may be slow (or crash) due to memory needs :( ---
++ 3dttest++: AFNI version=AFNI_20.0.14 (Feb 22 2020) [64-bit]
++ Authored by: Zhark++
++ 1062762 voxels in -mask dataset
++ Covariates file: 3 columns, each with 40 rows
+ Covariate column labels: subjects;Age;RD_x
+ Found 2 numeric columns: Age RD_x
++ option -setA :: processing as LONG form (label label dset label dset ...)
++ have 40 volumes corresponding to option '-setA'
++ option -setB :: processing as LONG form (label label dset label dset ...)
++ have 40 volumes corresponding to option '-setB'
++ random seeds are 125403404 439562669
++ 2-sample test: '-AminusB' option is assumed
++ paired test: results will be rAAA - rBBB
++ loading covariates
++ Two samples: t-testing fixed covariates for similarity between groups
+ Age: mean of setA-setB=0 ; 2-sided p-value=1.0000
+ RD_x: mean of setA-setB=0 ; 2-sided p-value=1.0000
** FATAL ERROR: unable to open file .//Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/afni_programs/results_age_RDx//stats.ttest.0000.sdat for output
** Program compile date = Feb 22 2020
+ 3dttest++ ===== simulation jobs have finished (0.7 s elapsed)
+ 3dttest++ ===== starting 3dClustSim A: elapsed = 43.7 s
++ 3dClustSim: AFNI version=AFNI_20.0.14 (Feb 22 2020) [64-bit]
++ Authored by: RW Cox and BD Ward
++ Loading -insdat datasets
** FATAL ERROR: can't find any data in file './/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/afni_programs/results_age_RDx//stats.ttest.0000.sdat'
** Program compile date = Feb 22 2020
** FATAL ERROR: ===== 3dClustSim command failed
(( =====
** Program compile date = Feb 22 2020
Content of the command file :
#!/bin/tcsh -xef
#Created by PaulCharp, generated the Tue Feb 25 13:13:23 2020
# ---------------------- set process variables ----------------------
set projectRoot = /Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020
set anteriorMapsPath = /Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/
set posteriorMapsPath = /Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/
set pathAFNIResults = /Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/afni_programs/results_age_RDx/
set pathMaskGM = /Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/mask/gm_mask2.nii.gz
set pathCovariates = /Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/afni_programs/cov_afni_test_paul-age-RDx.txt
# ------------------------- process the data -------------------------
3dttest++ -prefix $pathAFNIResults/stats.ttest -AminusB -paired -ClustSim \
-mask $pathMaskGM \
-covariates $pathCovariates \
-setA anterior \
aa190123 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/aa190123_anterior_CorrMap.nii.gz" \
ab190042 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/ab190042_anterior_CorrMap.nii.gz" \
ab190290 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/ab190290_anterior_CorrMap.nii.gz" \
ac180154 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/ac180154_anterior_CorrMap.nii.gz" \
ac190061 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/ac190061_anterior_CorrMap.nii.gz" \
af180240 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/af180240_anterior_CorrMap.nii.gz" \
al190010 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/al190010_anterior_CorrMap.nii.gz" \
ap180304 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/ap180304_anterior_CorrMap.nii.gz" \
as180339 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/as180339_anterior_CorrMap.nii.gz" \
at190242 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/at190242_anterior_CorrMap.nii.gz" \
ca190124 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/ca190124_anterior_CorrMap.nii.gz" \
cb180248 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/cb180248_anterior_CorrMap.nii.gz" \
cc180235 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/cc180235_anterior_CorrMap.nii.gz" \
cd120206 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/cd120206_anterior_CorrMap.nii.gz" \
dc180155 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/dc180155_anterior_CorrMap.nii.gz" \
fs190028 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/fs190028_anterior_CorrMap.nii.gz" \
gp180395 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/gp180395_anterior_CorrMap.nii.gz" \
hb120162 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/hb120162_anterior_CorrMap.nii.gz" \
jc190060 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/jc190060_anterior_CorrMap.nii.gz" \
lh180279 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/lh180279_anterior_CorrMap.nii.gz" \
ll190110 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/ll190110_anterior_CorrMap.nii.gz" \
mb180238 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/mb180238_anterior_CorrMap.nii.gz" \
mb190108 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/mb190108_anterior_CorrMap.nii.gz" \
mb190109 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/mb190109_anterior_CorrMap.nii.gz" \
md180375 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/md180375_anterior_CorrMap.nii.gz" \
mm190138 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/mm190138_anterior_CorrMap.nii.gz" \
mw180172 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/mw180172_anterior_CorrMap.nii.gz" \
nb190291 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/nb190291_anterior_CorrMap.nii.gz" \
nd180349 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/nd180349_anterior_CorrMap.nii.gz" \
nd190246 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/nd190246_anterior_CorrMap.nii.gz" \
nr190079 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/nr190079_anterior_CorrMap.nii.gz" \
ps130401 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/ps130401_anterior_CorrMap.nii.gz" \
rb180165 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/rb180165_anterior_CorrMap.nii.gz" \
rr190112 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/rr190112_anterior_CorrMap.nii.gz" \
sa190013 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/sa190013_anterior_CorrMap.nii.gz" \
sc180156 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/sc180156_anterior_CorrMap.nii.gz" \
sl190193 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/sl190193_anterior_CorrMap.nii.gz" \
tb180329 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/tb180329_anterior_CorrMap.nii.gz" \
tl190111 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/tl190111_anterior_CorrMap.nii.gz" \
vf190067 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/vf190067_anterior_CorrMap.nii.gz" \
-setB posterior \
aa190123 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/aa190123_posterior_CorrMaps.nii.gz" \
ab190042 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/ab190042_posterior_CorrMaps.nii.gz" \
ab190290 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/ab190290_posterior_CorrMaps.nii.gz" \
ac180154 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/ac180154_posterior_CorrMaps.nii.gz" \
ac190061 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/ac190061_posterior_CorrMaps.nii.gz" \
af180240 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/af180240_posterior_CorrMaps.nii.gz" \
al190010 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/al190010_posterior_CorrMaps.nii.gz" \
ap180304 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/ap180304_posterior_CorrMaps.nii.gz" \
as180339 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/as180339_posterior_CorrMaps.nii.gz" \
at190242 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/at190242_posterior_CorrMaps.nii.gz" \
ca190124 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/ca190124_posterior_CorrMaps.nii.gz" \
cb180248 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/cb180248_posterior_CorrMaps.nii.gz" \
cc180235 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/cc180235_posterior_CorrMaps.nii.gz" \
cd120206 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/cd120206_posterior_CorrMaps.nii.gz" \
dc180155 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/dc180155_posterior_CorrMaps.nii.gz" \
fs190028 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/fs190028_posterior_CorrMaps.nii.gz" \
gp180395 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/gp180395_posterior_CorrMaps.nii.gz" \
hb120162 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/hb120162_posterior_CorrMaps.nii.gz" \
jc190060 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/jc190060_posterior_CorrMaps.nii.gz" \
lh180279 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/lh180279_posterior_CorrMaps.nii.gz" \
ll190110 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/ll190110_posterior_CorrMaps.nii.gz" \
mb180238 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/mb180238_posterior_CorrMaps.nii.gz" \
mb190108 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/mb190108_posterior_CorrMaps.nii.gz" \
mb190109 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/mb190109_posterior_CorrMaps.nii.gz" \
md180375 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/md180375_posterior_CorrMaps.nii.gz" \
mm190138 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/mm190138_posterior_CorrMaps.nii.gz" \
mw180172 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/mw180172_posterior_CorrMaps.nii.gz" \
nb190291 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/nb190291_posterior_CorrMaps.nii.gz" \
nd180349 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/nd180349_posterior_CorrMaps.nii.gz" \
nd190246 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/nd190246_posterior_CorrMaps.nii.gz" \
nr190079 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/nr190079_posterior_CorrMaps.nii.gz" \
ps130401 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/ps130401_posterior_CorrMaps.nii.gz" \
rb180165 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/rb180165_posterior_CorrMaps.nii.gz" \
rr190112 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/rr190112_posterior_CorrMaps.nii.gz" \
sa190013 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/sa190013_posterior_CorrMaps.nii.gz" \
sc180156 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/sc180156_posterior_CorrMaps.nii.gz" \
sl190193 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/sl190193_posterior_CorrMaps.nii.gz" \
tb180329 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/tb180329_posterior_CorrMaps.nii.gz" \
tl190111 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/tl190111_posterior_CorrMaps.nii.gz" \
vf190067 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/vf190067_posterior_CorrMaps.nii.gz" \
Content of the covariate file :
subjects Age RD_x
aa190123 7.0 12.0
ab190042 7.3 10.0
ab190290 5.5 9.0
ac180154 5.2 8.0
ac190061 6.3 8.0
af180240 7.9 11.0
al190010 6.3 11.0
ap180304 10.0 7.0
as180339 5.9 5.0
at190242 7.5 8.0
ca190124 5.3 6.0
cb180248 12.9 10.0
cc180235 5.8 11.0
cd120206 12.3 14.0
dc180155 6.5 9.0
fs190028 4.7 3.0
gp180395 8.0 11.0
hb120162 12.1 13.0
jc190060 8.2 8.0
lh180279 5.9 8.0
ll190110 9.1 10.0
mb180238 8.1 10.0
mb190108 10.4 8.0
mb190109 10.4 12.0
md180375 10.4 11.0
mm190138 8.4 9.0
mw180172 11.5 9.0
nb190291 5.4 4.0
nd180349 12.6 12.0
nd190246 8.7 11.0
nr190079 7.4 6.0
ps130401 11.5 15.0
rb180165 5.9 11.0
rr190112 5.8 7.0
sa190013 11.2 12.0
sc180156 9.9 12.0
sl190193 7.2 8.0
tb180329 9.1 11.0
tl190111 5.5 13.0
vf190067 10.5 14.0
I’m having a trouble using ClustSim command. I have a fatal error : unable to open file .//Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/afni_programs/results_age_RDx//stats.ttest.0000.sdat for output. I went looking on internet but found nothing. My lab mates don’t know how to solve it neither. I’ll send you the console content and the file containing the commands hoping you could sort this out. I first thought it was a permission issue so I gave it sudo access but I didn’t work.
Thank you for you help :)
sudo tcsh /Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/afni_programs/test_afni_paul_age-RDx.txt
Password:
++ 3dttest++: AFNI version=AFNI_20.0.14 (Feb 22 2020) [64-bit]
++ Authored by: Zhark++
++ Number of -Clustsim threads set to 12
+ Default clustsim prefix set to '/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/afni_programs/results_age_RDx//stats.ttest'
++ 1062762 voxels in -mask dataset
++ Covariates file: 3 columns, each with 40 rows
+ Covariate column labels: subjects;Age;RD_x
+ Found 2 numeric columns: Age RD_x
++ option -setA :: processing as LONG form (label label dset label dset ...)
++ have 40 volumes corresponding to option '-setA'
++ option -setB :: processing as LONG form (label label dset label dset ...)
++ have 40 volumes corresponding to option '-setB'
++ paired test: results will be anterior - posterior
++ loading covariates
++ Two samples: t-testing fixed covariates for similarity between groups
+ Age: mean of setA-setB=0 ; 2-sided p-value=1.0000
+ RD_x: mean of setA-setB=0 ; 2-sided p-value=1.0000
++ loading -setA datasets
++ loading -setB datasets
++ t-testing:0123456789.0123456789.0123456789.0123456789.0123456789.!
++ ---------- End of analyses -- freeing workspaces ----------
++ Creating FDR curves in output dataset
++ Smallest FDR q [1 anterior-posterior_Zscr] = 1.44412e-13
*+ WARNING: Smallest FDR q [3 anterior-posterior_Age_Zscr] = 0.301255 ==> few true single voxel detections
*+ WARNING: Smallest FDR q [5 anterior-posterior_RD_x_Zscr] = 0.928554 ==> few true single voxel detections
++ Smallest FDR q [7 anterior_Zscr] = 7.33319e-14
*+ WARNING: Smallest FDR q [9 anterior_Age_Zscr] = 0.522571 ==> few true single voxel detections
*+ WARNING: Smallest FDR q [11 anterior_RD_x_Zscr] = 0.99987 ==> few true single voxel detections
++ Smallest FDR q [13 posterior_Zscr] = 1.04128e-13
*+ WARNING: Smallest FDR q [15 posterior_Age_Zscr] = 0.824983 ==> few true single voxel detections
*+ WARNING: Smallest FDR q [17 posterior_RD_x_Zscr] = 0.799738 ==> few true single voxel detections
+ Added 9 FDR curves to dataset
++ Output dataset /Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/afni_programs/results_age_RDx//stats.ttest.resid.nii
+ paired test: results are anterior - posterior
++ ================ Starting -ClustSim calculations ================
+ === temporary files will have prefix /Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/afni_programs/results_age_RDx//stats.ttest ===
+ === running 12 -randomsign jobs (834 iterations per job) ===
+ === creating 21,255,240,000 (21 billion) bytes of pseudo-data in .sdat files ===
+ --- 3dClustSim reads .sdat files to compute cluster-threshold statistics ---
+ --- there is 17,179,869,184 (17 billion) bytes of memory on your system ---
*+ WARNING: --- runs may be slow (or crash) due to memory needs :( ---
++ 3dttest++: AFNI version=AFNI_20.0.14 (Feb 22 2020) [64-bit]
++ Authored by: Zhark++
++ 1062762 voxels in -mask dataset
++ Covariates file: 3 columns, each with 40 rows
+ Covariate column labels: subjects;Age;RD_x
+ Found 2 numeric columns: Age RD_x
++ option -setA :: processing as LONG form (label label dset label dset ...)
++ have 40 volumes corresponding to option '-setA'
++ option -setB :: processing as LONG form (label label dset label dset ...)
++ have 40 volumes corresponding to option '-setB'
++ random seeds are 125403404 439562669
++ 2-sample test: '-AminusB' option is assumed
++ paired test: results will be rAAA - rBBB
++ loading covariates
++ Two samples: t-testing fixed covariates for similarity between groups
+ Age: mean of setA-setB=0 ; 2-sided p-value=1.0000
+ RD_x: mean of setA-setB=0 ; 2-sided p-value=1.0000
** FATAL ERROR: unable to open file .//Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/afni_programs/results_age_RDx//stats.ttest.0000.sdat for output
** Program compile date = Feb 22 2020
+ 3dttest++ ===== simulation jobs have finished (0.7 s elapsed)
+ 3dttest++ ===== starting 3dClustSim A: elapsed = 43.7 s
++ 3dClustSim: AFNI version=AFNI_20.0.14 (Feb 22 2020) [64-bit]
++ Authored by: RW Cox and BD Ward
++ Loading -insdat datasets
** FATAL ERROR: can't find any data in file './/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/afni_programs/results_age_RDx//stats.ttest.0000.sdat'
** Program compile date = Feb 22 2020
** FATAL ERROR: ===== 3dClustSim command failed
(( =====
** Program compile date = Feb 22 2020
Content of the command file :
#!/bin/tcsh -xef
#Created by PaulCharp, generated the Tue Feb 25 13:13:23 2020
# ---------------------- set process variables ----------------------
set projectRoot = /Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020
set anteriorMapsPath = /Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/
set posteriorMapsPath = /Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/
set pathAFNIResults = /Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/afni_programs/results_age_RDx/
set pathMaskGM = /Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/mask/gm_mask2.nii.gz
set pathCovariates = /Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/afni_programs/cov_afni_test_paul-age-RDx.txt
# ------------------------- process the data -------------------------
3dttest++ -prefix $pathAFNIResults/stats.ttest -AminusB -paired -ClustSim \
-mask $pathMaskGM \
-covariates $pathCovariates \
-setA anterior \
aa190123 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/aa190123_anterior_CorrMap.nii.gz" \
ab190042 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/ab190042_anterior_CorrMap.nii.gz" \
ab190290 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/ab190290_anterior_CorrMap.nii.gz" \
ac180154 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/ac180154_anterior_CorrMap.nii.gz" \
ac190061 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/ac190061_anterior_CorrMap.nii.gz" \
af180240 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/af180240_anterior_CorrMap.nii.gz" \
al190010 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/al190010_anterior_CorrMap.nii.gz" \
ap180304 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/ap180304_anterior_CorrMap.nii.gz" \
as180339 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/as180339_anterior_CorrMap.nii.gz" \
at190242 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/at190242_anterior_CorrMap.nii.gz" \
ca190124 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/ca190124_anterior_CorrMap.nii.gz" \
cb180248 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/cb180248_anterior_CorrMap.nii.gz" \
cc180235 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/cc180235_anterior_CorrMap.nii.gz" \
cd120206 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/cd120206_anterior_CorrMap.nii.gz" \
dc180155 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/dc180155_anterior_CorrMap.nii.gz" \
fs190028 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/fs190028_anterior_CorrMap.nii.gz" \
gp180395 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/gp180395_anterior_CorrMap.nii.gz" \
hb120162 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/hb120162_anterior_CorrMap.nii.gz" \
jc190060 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/jc190060_anterior_CorrMap.nii.gz" \
lh180279 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/lh180279_anterior_CorrMap.nii.gz" \
ll190110 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/ll190110_anterior_CorrMap.nii.gz" \
mb180238 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/mb180238_anterior_CorrMap.nii.gz" \
mb190108 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/mb190108_anterior_CorrMap.nii.gz" \
mb190109 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/mb190109_anterior_CorrMap.nii.gz" \
md180375 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/md180375_anterior_CorrMap.nii.gz" \
mm190138 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/mm190138_anterior_CorrMap.nii.gz" \
mw180172 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/mw180172_anterior_CorrMap.nii.gz" \
nb190291 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/nb190291_anterior_CorrMap.nii.gz" \
nd180349 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/nd180349_anterior_CorrMap.nii.gz" \
nd190246 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/nd190246_anterior_CorrMap.nii.gz" \
nr190079 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/nr190079_anterior_CorrMap.nii.gz" \
ps130401 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/ps130401_anterior_CorrMap.nii.gz" \
rb180165 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/rb180165_anterior_CorrMap.nii.gz" \
rr190112 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/rr190112_anterior_CorrMap.nii.gz" \
sa190013 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/sa190013_anterior_CorrMap.nii.gz" \
sc180156 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/sc180156_anterior_CorrMap.nii.gz" \
sl190193 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/sl190193_anterior_CorrMap.nii.gz" \
tb180329 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/tb180329_anterior_CorrMap.nii.gz" \
tl190111 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/tl190111_anterior_CorrMap.nii.gz" \
vf190067 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/anterior_correlation_map/bilateral/vf190067_anterior_CorrMap.nii.gz" \
-setB posterior \
aa190123 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/aa190123_posterior_CorrMaps.nii.gz" \
ab190042 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/ab190042_posterior_CorrMaps.nii.gz" \
ab190290 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/ab190290_posterior_CorrMaps.nii.gz" \
ac180154 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/ac180154_posterior_CorrMaps.nii.gz" \
ac190061 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/ac190061_posterior_CorrMaps.nii.gz" \
af180240 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/af180240_posterior_CorrMaps.nii.gz" \
al190010 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/al190010_posterior_CorrMaps.nii.gz" \
ap180304 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/ap180304_posterior_CorrMaps.nii.gz" \
as180339 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/as180339_posterior_CorrMaps.nii.gz" \
at190242 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/at190242_posterior_CorrMaps.nii.gz" \
ca190124 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/ca190124_posterior_CorrMaps.nii.gz" \
cb180248 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/cb180248_posterior_CorrMaps.nii.gz" \
cc180235 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/cc180235_posterior_CorrMaps.nii.gz" \
cd120206 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/cd120206_posterior_CorrMaps.nii.gz" \
dc180155 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/dc180155_posterior_CorrMaps.nii.gz" \
fs190028 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/fs190028_posterior_CorrMaps.nii.gz" \
gp180395 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/gp180395_posterior_CorrMaps.nii.gz" \
hb120162 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/hb120162_posterior_CorrMaps.nii.gz" \
jc190060 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/jc190060_posterior_CorrMaps.nii.gz" \
lh180279 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/lh180279_posterior_CorrMaps.nii.gz" \
ll190110 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/ll190110_posterior_CorrMaps.nii.gz" \
mb180238 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/mb180238_posterior_CorrMaps.nii.gz" \
mb190108 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/mb190108_posterior_CorrMaps.nii.gz" \
mb190109 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/mb190109_posterior_CorrMaps.nii.gz" \
md180375 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/md180375_posterior_CorrMaps.nii.gz" \
mm190138 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/mm190138_posterior_CorrMaps.nii.gz" \
mw180172 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/mw180172_posterior_CorrMaps.nii.gz" \
nb190291 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/nb190291_posterior_CorrMaps.nii.gz" \
nd180349 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/nd180349_posterior_CorrMaps.nii.gz" \
nd190246 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/nd190246_posterior_CorrMaps.nii.gz" \
nr190079 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/nr190079_posterior_CorrMaps.nii.gz" \
ps130401 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/ps130401_posterior_CorrMaps.nii.gz" \
rb180165 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/rb180165_posterior_CorrMaps.nii.gz" \
rr190112 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/rr190112_posterior_CorrMaps.nii.gz" \
sa190013 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/sa190013_posterior_CorrMaps.nii.gz" \
sc180156 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/sc180156_posterior_CorrMaps.nii.gz" \
sl190193 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/sl190193_posterior_CorrMaps.nii.gz" \
tb180329 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/tb180329_posterior_CorrMaps.nii.gz" \
tl190111 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/tl190111_posterior_CorrMaps.nii.gz" \
vf190067 \
"/Volumes/PaulCharp_LaCie_SSD/MEMODEV_Paul_2020/Data/normal_Fusion_LR/posterior_correlation_map/bilateral/vf190067_posterior_CorrMaps.nii.gz" \
Content of the covariate file :
subjects Age RD_x
aa190123 7.0 12.0
ab190042 7.3 10.0
ab190290 5.5 9.0
ac180154 5.2 8.0
ac190061 6.3 8.0
af180240 7.9 11.0
al190010 6.3 11.0
ap180304 10.0 7.0
as180339 5.9 5.0
at190242 7.5 8.0
ca190124 5.3 6.0
cb180248 12.9 10.0
cc180235 5.8 11.0
cd120206 12.3 14.0
dc180155 6.5 9.0
fs190028 4.7 3.0
gp180395 8.0 11.0
hb120162 12.1 13.0
jc190060 8.2 8.0
lh180279 5.9 8.0
ll190110 9.1 10.0
mb180238 8.1 10.0
mb190108 10.4 8.0
mb190109 10.4 12.0
md180375 10.4 11.0
mm190138 8.4 9.0
mw180172 11.5 9.0
nb190291 5.4 4.0
nd180349 12.6 12.0
nd190246 8.7 11.0
nr190079 7.4 6.0
ps130401 11.5 15.0
rb180165 5.9 11.0
rr190112 5.8 7.0
sa190013 11.2 12.0
sc180156 9.9 12.0
sl190193 7.2 8.0
tb180329 9.1 11.0
tl190111 5.5 13.0
vf190067 10.5 14.0
| Subject | Author | Posted |
|---|---|---|
|
PaulCharp2 | February 28, 2020 09:00AM |
|
rick reynolds | March 03, 2020 10:08AM |
