AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

Previous Message Next Message
Message List New Topic Print View
|
ns
March 12, 2020 11:22AM
Hi,
I'm having issues running @auto_tlrc on a new laptop (never had this issue before). In the attached screenshot, there is a list of files created before it stops

this is what I'm running in my script:
@auto_tlrc -apar ../$sub/$sub.struc_al+tlrc -input $sub.memory.cat.STbeta.+orig -dxyz 2.5

The messages that I see in the terminal:
++ Wrote bucket dataset into ./6475.memory.cat.STbeta.+orig.BRIK
+ created 1 FDR curves in bucket header
++ Wrote 3D+time dataset into ./fitts.6475.pic.cat+orig.BRIK
++ Program finished; elapsed time=29.220
Applying tlrc warp from ../LANG_6475/6475.struc_al+tlrc to 6475.memory.cat.STbeta.+orig ...
Padding the input data before warping
++ 3dZeropad: AFNI version=AFNI_19.3.09 (Oct 25 2019) [64-bit]
++ output dataset: ./__ats_tmp__ipad+orig.BRIK
Creating grid at (2.5 2.5 2.5)mm RAI resolution...
Direct warping per parent transform (cubic interpolation) ...
++ 3dWarp: AFNI version=AFNI_19.3.09 (Oct 25 2019) [64-bit]
++ Authored by: RW Cox
then: then/endif not found.

thank you!
ns
Reply Quote
Attachments:
open | download - Screen Shot 2020-03-12 at 11.20.49 AM.png (47.9 KB)
RSS
Subject Author Posted

@auto_tlrc issue Attachments

ns March 12, 2020 11:22AM

Re: @auto_tlrc issue

ptaylor March 12, 2020 11:39AM

Re: @auto_tlrc issue

ns March 12, 2020 12:22PM

Re: @auto_tlrc issue

ptaylor March 12, 2020 12:31PM