AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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October 11, 2021 03:28AM
Dear AFNI users,

I have problems with running @SSwarper on T1 data (T1 MPRAGE). I've run the script on 5 images and it worked perfect, but on 6th not :( It seems that top of brain is cut when creating anat.SS file (anat.S is fine!). I enclose printscreens.
I already updated afni binaries and it did not help. No idea what went wrong... I will be grateful for help.

Best!
Aleksandra
Attachments:
open | download - sswarper_problem.jpg (327 KB)
Subject Author Posted

@SSwarper - problem with skullstripping Attachments

Aleksandra Domagalik October 11, 2021 03:28AM

Re: @SSwarper - problem with skullstripping

Daniel Glen October 11, 2021 02:17PM