AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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February 28, 2022 12:56PM
Dear AFNI group

I am using 3dZcutup to trim my fmri data. However, when I used the 3dZcutup (AFNI version of AFNI_22.0.11, should be the latest version) in the command line as the following:
/software/AFNI_22.0.11/3dZcutup -prefix test+orig -keep 1 36 fmap_for_fmri1_dir_AP+orig
I got the following error:
++ 3dZcutup: AFNI version=AFNI_22.0.11 (Feb 18 2022) [64-bit]
*** Nonsense values after -keep!
According to [afni.nimh.nih.gov], I think I used the 3dZcutup correctly (please let me know if I didn't).

I also tried 3dZcutup using an older AFNI version (AFNI_17.2.17), like the following:
/software/AFNI_17.2.17/abin/3dZcutup -prefix test+orig -keep 1 36 fmap_for_fmri1_dir_AP+orig
This time, 3dZcutup worked well.

It looks like the latest version of 3dZcutup doesn't work like the old one. Is it a bug?

Sincerely,
Yixiang
Subject Author Posted

3dZcutup failure in AFNI version AFNI_22.0.11

ymao February 28, 2022 12:56PM

Re: 3dZcutup failure in AFNI version AFNI_22.0.11

rick reynolds February 28, 2022 03:15PM

Re: 3dZcutup failure in AFNI version AFNI_22.0.11

ptaylor February 28, 2022 03:25PM

Re: 3dZcutup failure in AFNI version AFNI_22.0.11

ptaylor February 28, 2022 03:23PM

Re: 3dZcutup failure in AFNI version AFNI_22.0.11

ymao March 01, 2022 03:35PM

Re: 3dZcutup failure in AFNI version AFNI_22.0.11

ptaylor March 01, 2022 06:08PM