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Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

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MikeyMalina
June 02, 2022 04:52PM
Hello,

My second level file is failing, and I'm receiving the model test failed, Possible Reasons: ... error message. This leaves things a little vague and I really have no clue as of now what the problem may be. Does any of my model specification look incorrect? For reference, this is a within-subjects analysis of drug/placebo effects on one of our first level contrasts (winVsNoWin) 

3dMVM -prefix MID_WINvsNOWIN -jobs 64 \
-bsVars 'Contrasts*Age+Sex+Motion' \
-wsVars 'Condition' \
-qVars 'Age,Motion' \
-qVarCenters '24.9,0.0918' \
-mask DDP_2ndLevelMask_resamp+tlrc \
-num_glt 2 \
-gltLabel 1 Drug_gt_placebo -gltCode 1 'Condition : 1*Dr -1*Pl Contrasts : 1*WinVsNoWin' \
-gltLabel 2 Placebo_gt_drug -gltCode 2 'Condition : 1*Pl -1*Dr Contrasts : 1*WinVsNoWin' \
-dataTable \
Subj	Condition	Age	Sex	Motion	Contrasts	InputFile	\
700_S1	Dr		22	F	0.0713	WinVsNoWin	/project2/hdew/DDP/DDP700_S1/preproc/MID/Results/keepBT/DDP700_S1.results/stats.DDP700_S1_REML+tlrc.'[29]' \
700_S2	Pl		22	F	0.0638	WinVsNoWin	/project2/hdew/DDP/DDP700_S2/preproc/MID/Results/keepBT/DDP700_S2.results/stats.DDP700_S2_REML+tlrc.'[29]' \
701_S1  Pl		32	F	0.0646	WinVsNoWin	/project2/hdew/DDP/DDP701_S1/preproc/MID/Results/keepBT/DDP701_S1.results/stats.DDP701_S1_REML+tlrc.'[29]' \
701_S2	Dr		32	F	0.0957	WinVsNoWin	/project2/hdew/DDP/DDP701_S2/preproc/MID/Results/keepBT/DDP701_S2.results/stats.DDP701_S2_REML+tlrc.'[29]' \
703_S1  Pl		25	F	0.0854	WinVsNoWin	/project2/hdew/DDP/DDP703_S1/preproc/MID/Results/keepBT/DDP703_S1.results/stats.DDP703_S1_REML+tlrc.'[29]' \
703_S2	Dr		25	F	0.0728	WinVsNoWin	/project2/hdew/DDP/DDP703_S2/preproc/MID/Results/keepBT/DDP703_S2.results/stats.DDP703_S2_REML+tlrc.'[29]' \
705_S1  Pl		29	F	0.0999	WinVsNoWin	/project2/hdew/DDP/DDP705_S1/preproc/MID/Results/keepBT/DDP705_S1.results/stats.DDP705_S1_REML+tlrc.'[29]' \
705_S2	Dr		29	F	0.0650	WinVsNoWin	/project2/hdew/DDP/DDP705_S2/preproc/MID/Results/keepBT/DDP705_S2.results/stats.DDP705_S2_REML+tlrc.'[29]' \
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Subject Author Posted

Model Test Failed! Second level glt script

MikeyMalina June 02, 2022 04:52PM

Re: Model Test Failed! Second level glt script

gang June 05, 2022 02:12PM