Show all posts by user
Dear AFNI users-
We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:
https://discuss.afni.nimh.nih.gov
Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.
The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.
Sincerely,
AFNI HQ
History of AFNI updates
Page 1 of 1 Pages: 1
Results 1 - 7 of 7
I'm getting similar problems with the latest afni version
$ afni -version
Precompiled binary macosx_10.7_Intel_64: May 25 2018 (Version AFNI_18.1.18)
by
Matteo Visconti dOC
-
AFNI Message Board
Hi AFNI Gurus,
I'm encountering some issues with long filenames using AFNI programs. I have long filenames such as
group_task-fam1back_space-hpalsid000005fsaverage6_hemi-R_cvrsa_metric-zcorrelation_sl_target-id+or+mi+ge_pred-identity_avg_thr.niml.dset
If I try to load this with SUMA using the GUI, it says that it's unable to read it:
Critical error SUMA_LoadNimlDset (suma_dat
by
Matteo Visconti dOC
-
AFNI Message Board
Thanks for the explanation, Bob. The filesystem on our cluster is indeed mounted with NFS. I will happily ignore these errors then.
by
Matteo Visconti dOC
-
AFNI Message Board
Dear gurus,
I'm running the following 3dttest++ command
3dttest++ \
-setA $INDIR/sub-*/*MNI*deconvolve*.nii.gz'[$BRICK]' \
-mask $BASEDIR/derivatives/unionmask/group/group_space-MNI152NLin2009cAsym_unionbrainmask.nii.gz \
-Clustsim \
-prefix $OUTDIR/clust_brick$BRICK\.nii.gz \
-prefix_clustsim clust_brick$BRICK
it finishes happily, and when I load the resul
by
Matteo Visconti dOC
-
AFNI Message Board
BTW, I can confirm that the error seems to occur with Mac OS (at least on my system) but not linux. It works perfectly fine on a virtual machine.
by
Matteo Visconti dOC
-
AFNI Message Board
Hi Rick,
thank you for your reply. Modifying the shebang in @DriveSuma doesn't help, unfortunately.
Just to make sure, the issues I had was with DriveSuma, not with the demo @DriveSuma (which crashes as well but for another maybe unrelated issue).
Thanks,
Matteo
by
Matteo Visconti dOC
-
AFNI Message Board
Hi all,
I'm having troubles with DriveSuma on macOs sierra 10.12.4. I reinstalled the latest version of Xquartz (2.7.11) and updated AFNI to the latest version (Precompiled binary macosx_10.7_Intel_64: Mar 29 2017 (Version AFNI_17.0.18)), but the issues is still there. Also, I made sure that DYLD_LIBRARY_PATH points to /opt/X11/lib/flat_namespace
Whenever I run two commands that modif
by
Matteo Visconti dOC
-
AFNI Message Board