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Dear AFNI users-
We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:
https://discuss.afni.nimh.nih.gov
Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.
The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.
Sincerely,
AFNI HQ
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Hi Rick,
It is bilateral. Check for example:
TLRC coordinates: -51, -9, -31 and 44, -9 -41 (Inferior temporal gyrus)
Thanks,
Eyesha
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Eyesha
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AFNI Message Board
Hi Rick,
Thanks for your help.
Yes. I did notice the motion in anatomical. And this is the EPI resolution that we have.
I do run the @ss_review_driver but as I am a beginner, I thought I would double check my processing.
I noticed what seems like a little bit of clipping of EPI..it is obvious in some slices in EPI in the coronal plane (I think slice 89 is the best example). I looks li
by
Eyesha
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AFNI Message Board
Hi Rick,
Many thanks for help.
I just uploaded the file Eyesha.tgz, which hopefully has all the data that you would need to run a check.
I am very interested in using the hot-off-the-grill @snapshot_volreg, and I updated my AFNI just now, but I get the following error message:
My command: @snapshot_volreg anat_final.acu0023+tlrc all_runs.acu0023+tlrc acu0023_A2E
Message: ** ER
by
Eyesha
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AFNI Message Board
Thank you for the reply, Daniel.
I am wondering if I can send you my processed data (the final anat and all_runs epi) for a quick check. The volumes seems to be aligned well. There is however a few instances where the edges of the epi slices seem to be smaller in size. I am not sure where is this coming from and if it is curable.
Eyesha
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Eyesha
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AFNI Message Board
Dear Afni experts,
I am a new user of Afni and I am using it for analyzing rs-fMRI data.
I was getting warning messages about obliquity of data, and alignment between anat and EPI was miserable. I have tried a few things and they have worked, but I am not sure which one is the best option and why?
This is what I have tried:
1- I used 3dwarp on anat alone and then on anat and EPI
by
Eyesha
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AFNI Message Board