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Dear AFNI users-
We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:
https://discuss.afni.nimh.nih.gov
Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.
The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.
Sincerely,
AFNI HQ
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Hi!
Thank you kindly for your comments. I get and appreciate your point. This is also my observation that sometimes we deal with misunderstanding and misusing of methods in computational neuroscience. Nevertheless, I could see a significant amount of publications, even in reputable journals applying the 3dClustSim for thresholding cross-platform. I wonder, why should it necessarily be bad, if
by
garden
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AFNI Message Board
Dear Colleagues
I have an absolute beginner question (I`ve just installed AFNI for the first time...):
how to run the 3dClustSim to determine the cluster size threshold for 2nd level contrasts? Results come from an ICA analysis in GIFT (spatial maps), preprocessing was done with SPM12. Most importantly: what is the INPUT for both 3dFWHMx and 3dClustSim? Is it an actual t-contrast image (e.g
by
garden
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AFNI Message Board