AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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October 04, 2012 01:23PM
Hi Lydia,

The TENTzero() basis functions are identical to those of TENT,
except that the first and last basis function are not included (so
the endpoints are *assumed* to be zero, and are not estimated).

So TENTzero(0,14,8) is identical to TENT(2,12,6). I suggest you
stick with TENT(2,12,6) because it is more clear what you are
doing. It is not terribly appropriate to plot the zero endpoints in the
case of TENTzero, because they were not estimated as such.

The only magic here is that you are using fewer basis functions,
making it more likely that the system of equations has a single
least squares solution.

You got into trouble when going from GAM to TENT(0,14,8) because
that multiplied the number of basis functions by 8. But it became an
even bigger issue because the stimuli are TR-locked (so regressors
are 0/1 binary, rather than fractions). When switching to TENT(2,12,6)
or even TENT(2,10,5), as suggested by Gang, the number of basis
functions was then reduced by 25 to 37.5%, and since it was apparently
just the endpoint regressors which were identical, the model worked (or
was at least solvable). It might have still failed.

I expect that the results are noisy, even though the analysis completed,
because there are so many regressors.

- rick
Subject Author Posted

TENT collinearity error

Lydia Yee October 03, 2012 10:58AM

Re: TENT collinearity error

gang October 03, 2012 12:02PM

Re: TENT collinearity error

Lydia Yee October 04, 2012 09:57AM

Re: TENT collinearity error

rick reynolds October 04, 2012 01:23PM

Re: TENT collinearity error

Lydia Yee October 05, 2012 08:02PM