AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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January 31, 2013 04:51PM
Hi Isaac,

Basically, your dataset mask is so small that cluster simulation is
not stable. You are getting tons of warning messages which are
being accumulated before being printed out (so that they appear
at the end, I expect, so that one actually sees them).

In the case of -LOTS (and -niml implies it, apparently), there are
many pthr values to simulate at, and each one generates many
warnings.

With so many warnings the internal warning buffer limit is
eventually exceeded.

Consider specifying your own -pthr option, and put it AFTER -niml,
because -niml will stick in the long list again.

Of course, you will still get lots of warnings, but at least you will
be able to see them all.

- rick
Subject Author Posted

3dClustSim memory corruption with a small mask

Isaac Schwabacher January 31, 2013 03:39PM

Re: 3dClustSim memory corruption with a small mask

rick reynolds January 31, 2013 04:51PM

Re: 3dClustSim memory corruption with a small mask

Isaac Schwabacher January 31, 2013 06:26PM

Re: 3dClustSim memory corruption with a small mask

rick reynolds February 01, 2013 09:28AM

Re: 3dClustSim memory corruption with a small mask

Isaac Schwabacher February 01, 2013 06:23PM