Hi all-
Our group is getting the following error message shortly after starting AFNI on one of our iMacs; specifically after opening a few datasets and working for 1-2 minutes. Seems to be isolated to one iMac. We've re-downloaded AFNI binaries but the message persists. I'm thinking there's a conflict with the OS or X11, but would like to have some expert input before I start reinstalling things.
I couldn't find much in the Message Board - did try AFNI_FLOATSCAN = YES to no avail, per this not quite related thread: [
afni.nimh.nih.gov]
As you can see, we haven't installed the packages for image save, but this neglect has not caused problems in the past (other similar machines.) I am wondering about "Illegal driver custom duplication '3DSVM'"
Thanks!
Josh
console output:
Thanks go to KM Donahue for useful feedback
Initializing: X11.
++++++++ IMAGE SAVE SETUP WARNINGS ++++++++
++ Can't find program ppmtogif AND/OR ppmquant for Save to GIF
++ Can't find program ppm2tiff OR pnmtotiff OR pamtotiff for Save to TIFF
++ Can't find program ppmtobmp for Save to BMP
++ Can't find program pnmtopng for Save to PNG
++ Some of the missing image Save programs are in
++ the netpbm software package, which is freeware.
++ The 'fink' package at [
fink.sourceforge.net]
++ is a way to get the netpbm programs for OS X; *OR*
++ Netpbm can be found at [
netpbm.sourceforge.net]
++ To disable these warnings, set environment
++ variable AFNI_IMSAVE_WARNINGS to 'NO'.
+++++++++++++++++++++++++++++++++++++++++++
. Widgets...... Input files:
session # 1 = /Volumes/Data2/Diet_Resting_aug12/2016/tmp2/ ==> 136 datasets
dataset count = 136
Time series = 88 files read
NLfit & NLerr= Optimizer (AFNI_NLFIM_METHOD) is SIMPLEX
NLfit & NLerr= Found 50 models** ERROR: Illegal driver custom duplication '3DSVM'
NLfit & NLerr= Optimizer (AFNI_NLFIM_METHOD) is SIMPLEX
NLfit & NLerr= Found 50 models
Plugins = 104 libraries read
++ This version of AFNI was built Feb 7 2013 ++
++ 'Define Markers' is hidden: right-click 'DataDir' to see it
Fatal Signal 11 (SIGSEGV) received
AFNI:main
Bottom of Debug Stack
** AFNI version = AFNI_2011_12_21_1014 Compile date = Feb 7 2013
** [[Precompiled binary macosx_10.6_Intel_64: Feb 7 2013]]
** Program Abort **
** If you report this crash to the AFNI message board,
** please copy the error messages EXACTLY, and give
** the command line you used to run the program, and
** any other information needed to repeat the problem.
** You may later be asked to upload data to help debug.
---------------------------------
Josh Powell
Research Associate
Center for Health Behavior Neuroscience
University of Kansas Medical Center
jpowell <two> <at> kumc <dot> edu