AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

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rick reynolds
March 12, 2013 10:44AM
Hi Gaurav,

You can use whatever tool (e.g. 3dROIstats, 3dclust) to make a
text file of the maximum cluster coordinates, and then use 3dUndump
with the -master, -xyz, -srad and maybe -orient options to create a new
dataset of the spheres.

The -orient option is a good idea, to tell 3dUndump what the x, y and z
coordinates mean, since they may not match those of the -master
dataset.

- rick
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scripting roi creation

gauravm March 12, 2013 10:02AM

Re: scripting roi creation

rick reynolds March 12, 2013 10:44AM