AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

|
April 20, 2013 04:36PM
Hi,

I'm getting the following error message shortly after starting afni, specifically the visualizer - haven't had any issues running scripts or on the command line. I saw that there was a similar problem posted about 2 months ago where the individual had 2 sets of afni binaries in the path, but it looks okay to me. ANy suggestions?

Thanks,
Michelle


Initializing: X11.. Widgets...... Input files:
session # 1 = /local/mri/experiments/Pronoun_Shboof/group_analysis/pct_signal_Apr2011_NP_offset/ ==> 258 datasets
dataset count = 258
Time series = 6 files read
NLfit & NLerr= Optimizer (AFNI_NLFIM_METHOD) is SIMPLEX
NLfit & NLerr= Found 25 models
Plugins = 52 libraries read

++ This version of AFNI was built Jan 11 2012 ++
++ 'Define Markers' is hidden: right-click 'DataDir' to see it
++ NOTE: you may want to consider creating a '.afnirc' file in your home
directory, to control AFNI's setup. For more details, see
[afni.nimh.nih.gov]

Fatal Signal 11 (SIGSEGV) received
Bottom of Debug Stack
** AFNI version = AFNI_2011_12_21_1014 Compile date = Jan 11 2012
** [[Precompiled binary linux_gcc33_64: Jan 11 2012]]
** Program Abort **
** If you report this crash to the AFNI message board,
** please copy the error messages EXACTLY, and give
** the command line you used to run the program, and
** any other information needed to repeat the problem.
** You may later be asked to upload data to help debug.

[1]+ Exit 1 afni
kathleen@ka:/local/mri/experiments/Pronoun_Shboof/group_analysis/pct_signal_Apr2011_NP_offset$ $PATH
bash: /local/afni/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games: No such file or directory
kathleen@ka:/local/mri/experiments/Pronoun_Shboof/group_analysis/pct_signal_Apr2011_NP_offset$
Subject Author Posted

Fatal Signal 11 (SIGSEGV)

Michelle Ferrill April 20, 2013 04:36PM

Re: Fatal Signal 11 (SIGSEGV)

nick April 21, 2013 12:25PM

Re: Fatal Signal 11 (SIGSEGV)

rick reynolds April 22, 2013 01:55PM