History of AFNI updates  

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April 21, 2013 12:25PM
Michelle Ferrill Wrote:
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> I'm getting the following error message shortly
> after starting afni, specifically the visualizer -
> haven't had any issues running scripts or on the
> command line.
> [...]
> ++ This version of AFNI was built Jan 11 2012 ++

You have a rather old version of afni. As a first step I would suggest to update it using "\@update.afni.binaries -d" (prefix with "sudo " if you need admin privileges).

> Fatal Signal 11 (SIGSEGV) received
> Bottom of Debug Stack

Do you have this problem when you start afni in another directory?
It might be the case that one of the files that AFNI sees is not as expected.

> kathleen@ka:/local/mri/experiments/Pronoun_Shboof/
> group_analysis/pct_signal_Apr2011_NP_offset$
> $PATH
> bash:
> /local/afni/bin:/usr/local/sbin:/usr/local/bin:/us
> r/sbin:/usr/bin:/sbin:/bin:/usr/games: No such
> file or directory

Just a small note: you're trying to execute whatever the contents is of $PATH.
The proper way to show the contents of $PATH is "echo $PATH".

best,
Nick
Subject Author Posted

Fatal Signal 11 (SIGSEGV)

Michelle Ferrill April 20, 2013 04:36PM

Re: Fatal Signal 11 (SIGSEGV)

nick April 21, 2013 12:25PM

Re: Fatal Signal 11 (SIGSEGV)

rick reynolds April 22, 2013 01:55PM