AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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April 22, 2013 08:05PM
Hi Wayne,

Hard to tell what is going on but I suspect the dataset are way off compared to the template. For example, if datasets are quite oblique you can specify an initial transform to deoblique them first. Read @auto_tlrc's help for option -init_xform and see if suggestions made there help you get better results.
Otherwise, upload a sample dataset and I will try to look into what is causing the alignment to fail.

cheers,
z
Subject Author Posted

@auto_tlrc produces poor result

Wayne April 21, 2013 07:24PM

Re: @auto_tlrc produces poor result

ziad April 22, 2013 08:05PM