AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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May 16, 2013 06:46AM
If you have an up-to-date version of AFNI (less than a month old), you can try this first

3dUnifize -input ANAT+orig -prefix ANATuni

This will (approximately) unshade the T1-weighted volume, and then you can try 3dSkullStrip on the ANATuni+orig dataset.

All this is assuming the original volume is at about 1x1x1 mm resolution, which is what we are used to.
Subject Author Posted

3dskullstrip

Juen May 15, 2013 09:59PM

Re: 3dskullstrip

Bob Cox May 16, 2013 06:46AM

Re: 3dskullstrip

Juen May 16, 2013 09:30AM

Re: 3dskullstrip

Bob Cox May 16, 2013 01:39PM