Hey guys,

I am trying to create a mask of "Area 6" (atlas label 210) of the TT_N27_CA_EZ_MPM atlas, and having some problems. Endeavored to use:

3dmaskave -mask TT_N27_CA_EZ_MPM:both:Area 6 Func+tlrc

but AFNI informs me it can't read the mask dataset. I assume this means I am not referring to the atlas and/or subarea correctly in the script but want to be sure. I pulled the script itself from AFNI lesson afni11_roi.pdf "Regions of Interest (ROIs) for those interested in regions" Option 3.

In tandem with that I wanted to know if theres a way of extracting all of Area 6 ROI as a mask, without having to define it in tandem with a functional volume as the script seems to imply.

Thanks as always,

Dane



Edited 1 time(s). Last edit at 08/20/2013 10:04PM by d6anders.