AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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September 09, 2013 11:55AM
Dear all,
I am trying to rotate an epi series using 3drotate. The command I am using is reasonable:
3drotate -rotate -90L 0A 0I -prefix L-90.nii SPINAL-002_WIP_TSE_BOLD.nii
The output image is rotated but it has a couple of slits which cut off the top left and bottom right corners of the image. I tried to attach a snapshot of the output but can't see it attached with the message. I'll be happy to upload the data file for you to see. Any help is much appreciated.

Thanks and regards,
Gaurav
Subject Author Posted

Issue with rotating epi sequence with 3drotate

gauravm September 09, 2013 11:55AM

Re: Issue with rotating epi sequence with 3drotate

Daniel Glen September 09, 2013 12:28PM

Re: Issue with rotating epi sequence with 3drotate

gauravm September 09, 2013 01:36PM

Re: Issue with rotating epi sequence with 3drotate

gauravm September 09, 2013 01:38PM

Re: Issue with rotating epi sequence with 3drotate

Daniel Glen September 09, 2013 01:44PM

Re: Issue with rotating epi sequence with 3drotate

gauravm September 10, 2013 04:41PM

Re: Issue with rotating epi sequence with 3drotate

Daniel Glen September 10, 2013 05:26PM

Re: Issue with rotating epi sequence with 3drotate

rick reynolds September 09, 2013 01:52PM

Re: Issue with rotating epi sequence with 3drotate

gauravm September 10, 2013 04:46PM