History of AFNI updates  

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November 20, 2013 03:14PM
Dear AFNI experts,

In the passed I used @AddEdge with +orig datasets, but we've now started to move to +tlrc.

It seems that @AddEdge does not support +tlrc (see below); and I found that the script has '+orig' postfixes all over the place. Is that correct? If so, are there any plans to add +tlrc support?

Of course I can copy/refit to +orig and then apply +tlrc later, but that's a bit of a hassleā€¦

cheers,
Nick

$ \@AddEdge anat_mni_ss+tlrc fs_SurfVol_al2exp+tlrc.HEAD
++ 3dcopy: AFNI version=AFNI_2011_12_21_1014 (Sep 30 2013) [64-bit]
++ 3dAutobox: AFNI version=AFNI_2011_12_21_1014 (Sep 30 2013) [64-bit]
++ Executing 3dcalc()
argv[0]=3dcalc argv[1]=-a argv[2]=tmp_avg+orig argv[3]=-b argv[4]=_ae.anat_mni_ss+tlrc argv[5]=-expr argv[6]=((a+b)/2.0) argv[7]=-session argv[8]=/var/folders/g0/rz0mb_cd45xfznypdy_5d8780000gn/T/ argv[9]=-prefix argv[10]=3dcalc_XYZ_YqRCUvABkhXsZPEL4XVIWA argv[11]=-verbose
++ 3dcalc: AFNI version=AFNI_2011_12_21_1014 (Sep 30 2013) [64-bit]
++ Authored by: A cast of thousands
** FATAL ERROR: can't open dataset tmp_avg+orig
** Program compile date = Sep 30 2013
** ERROR: 3dcalc() failed - no dataset created!
** FATAL ERROR: Can't open dataset '3dcalc( -a tmp_avg+orig -b _ae.anat_mni_ss+tlrc -expr ((a+b)/2.0) )'
** Program compile date = Sep 30 2013
++ 3dedge3: AFNI version=AFNI_2011_12_21_1014 (Sep 30 2013) [64-bit]
** ERROR: output dataset name 'anat_mni_ss_e3' conflicts with existing file
** ERROR: dataset NOT written to disk!
** FATAL ERROR: Can't open dataset 'anat_mni_ss_e3+orig'
** Program compile date = Sep 30 2013
eth: Subscript out of range.
Subject Author Posted

@AddEdge does not support +tlrc?

nick November 20, 2013 03:14PM